RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 MAGEB16A2A368 324 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 SAGE2PA6NJ88 616 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 TMEM200CA6NKL6 621 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 CDC40O60508 579 aaKnown RBP eCLIP11.24□□□□□ -0.61
PRPF8-215ENST00000576958 PRAMEF4O60810 478 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 TBX6O95947 436 aaPredicted RBP11.24□□□□□ -0.61
PRPF8-215ENST00000576958 SLC35G6P0C7Q6 338 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 CD46P15529 392 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 ZNF24P17028 368 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 PGAM1P18669 254 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 SAT1P21673 171 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 PTGER4P35408 488 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 MEOX1P50221 254 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 CCR8P51685 355 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 REEP5Q00765 189 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 PPP1R3AQ16821 1122 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.24□□□□□ -0.617e-13■□□□□ 11.3
PRPF8-215ENST00000576958 BBS9Q3SYG4 887 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 TEDDM1Q5T9Z0 273 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 PRAMEF9Q5VWM5 478 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 XKRXQ6PP77 449 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 SBSNQ6UWP8 590 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 ZNF662Q6ZS27 426 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 CEP128Q6ZU80 1094 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 CLNKQ7Z7G1 428 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 CD163Q86VB7 1156 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 LRRC8AQ8IWT6 810 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 SULF2Q8IWU5 870 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 SLC5A8Q8N695 610 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 ZNF321PQ8N8H1 164 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 APCDD1LQ8NCL9 501 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 TRIM58Q8NG06 486 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 OR52N2Q8NGI0 321 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 NT5CQ8TCD5 201 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 CREB3L4Q8TEY5 395 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 ANKRD49Q8WVL7 239 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 SDCCAG3Q96C92 435 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 PDLIM2Q96JY6 352 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 OR1F2PQ96R84 312 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 CHST11Q9NPF2 352 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 NPDC1Q9NQX5 325 aaPredicted RBP11.24□□□□□ -0.61
PRPF8-215ENST00000576958 ZFATQ9P243 1243 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 CHMP2BQ9UQN3 213 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 MED13LQ71F56 2210 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 TRBV11-1A0A0K0K1C0 115 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 TCRBV16S1A1N1A0A5B0 115 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 FAM90A27PA6NNH2 459 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 ZNF354AO60765 605 aaPredicted RBP11.23□□□□□ -0.61
PRPF8-215ENST00000576958 MYO1DO94832 1006 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 SMIM10L1P0DMW3 83 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 HRH2P25021 359 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 IVDP26440 423 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 HNRNPH1P31943 449 aaKnown RBP11.23□□□□□ -0.61
PRPF8-215ENST00000576958 CASP6P55212 293 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 SP140Q13342 867 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 FASTKD3Q14CZ7 662 aaKnown RBP11.23□□□□□ -0.61
PRPF8-215ENST00000576958 HERC3Q15034 1050 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 RBBP5Q15291 538 aaKnown RBP11.23□□□□□ -0.61
PRPF8-215ENST00000576958 TESK1Q15569 626 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 CMPK2Q5EBM0 449 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 XKR6Q5GH73 641 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 EMC4Q5J8M3 183 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 DUPD1Q68J44 220 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 TMPRSS11BQ86T26 416 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 THOC6Q86W42 341 aaKnown RBP11.23□□□□□ -0.61
PRPF8-215ENST00000576958 CCDC71Q8IV32 467 aaPredicted RBP11.23□□□□□ -0.61
PRPF8-215ENST00000576958 CEP97Q8IW35 865 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 CNTN4Q8IWV2 1026 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 PPIL6Q8IXY8 311 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.23□□□□□ -0.61
PRPF8-215ENST00000576958 SLC35F6Q8N357 371 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 SPATA6LQ8N4H0 392 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 FAM47BQ8NA70 645 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 SLC5A11Q8WWX8 675 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 FBXL8Q96CD0 374 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 CERS2Q96G23 380 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 SMIM10Q96HG1 83 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 CSF3RQ99062 836 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 SARGQ9BW04 601 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 SLC6A16Q9GZN6 736 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 PCBD2Q9H0N5 130 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 DDX47Q9H0S4 455 aaKnown RBP11.23□□□□□ -0.61
PRPF8-215ENST00000576958 PNO1Q9NRX1 252 aaKnown RBP11.23□□□□□ -0.61
PRPF8-215ENST00000576958 TAS2R13Q9NYV9 303 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 ZFP69BQ9UJL9 534 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 PPT2Q9UMR5 302 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 SLC22A14Q9Y267 594 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 PCDHGB6Q9Y5F9 930 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 LIPGQ9Y5X9 500 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 COMMD10Q9Y6G5 202 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 HCFC1P51610 2035 aa11.23□□□□□ -0.61
PRPF8-215ENST00000576958 FAM166BA8MTA8 275 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 EIF3FO00303 357 aaPredicted RBP11.22□□□□□ -0.61
PRPF8-215ENST00000576958 PRMT3O60678 531 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 KRT38O76015 456 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 TPOP07202 933 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 CYC1P08574 325 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 ELK3P41970 407 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 CYB561P49447 251 aa11.22□□□□□ -0.61
PRPF8-215ENST00000576958 RGS4P49798 205 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms