RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 CLCQ05315 142 aa14.4□□□□□ -0.1
LITAF-217ENST00000575426 KLC1Q07866 573 aa14.4□□□□□ -0.1
LITAF-217ENST00000575426 HYAL2Q12891 473 aa14.4□□□□□ -0.1
LITAF-217ENST00000575426 UNC50Q53HI1 259 aa14.4□□□□□ -0.1
LITAF-217ENST00000575426 CCNYL1Q8N7R7 359 aa14.4□□□□□ -0.1
LITAF-217ENST00000575426 BANPQ8N9N5 519 aa14.4□□□□□ -0.1
LITAF-217ENST00000575426 OR2L5Q8NG80 312 aa14.4□□□□□ -0.1
LITAF-217ENST00000575426 OR52B6Q8NGF0 335 aa14.4□□□□□ -0.1
LITAF-217ENST00000575426 TRPC4APQ8TEL6 797 aa14.4□□□□□ -0.1
LITAF-217ENST00000575426 ZNF473Q8WTR7 871 aaKnown RBP14.4□□□□□ -0.1
LITAF-217ENST00000575426 NACC2Q96BF6 587 aa14.4□□□□□ -0.1
LITAF-217ENST00000575426 MS4A6EQ96DS6 147 aa14.4□□□□□ -0.1
LITAF-217ENST00000575426 CDK15Q96Q40 435 aa14.4□□□□□ -0.1
LITAF-217ENST00000575426 SPSB2Q99619 263 aa14.4□□□□□ -0.1
LITAF-217ENST00000575426 TGIF2Q9GZN2 237 aa14.4□□□□□ -0.1
LITAF-217ENST00000575426 COPS7BQ9H9Q2 264 aaPredicted RBP14.4□□□□□ -0.1
LITAF-217ENST00000575426 ZBTB26Q9HCK0 441 aa14.4□□□□□ -0.1
LITAF-217ENST00000575426 MKS1Q9NXB0 559 aa14.4□□□□□ -0.1
LITAF-217ENST00000575426 HCN3Q9P1Z3 774 aa14.4□□□□□ -0.1
LITAF-217ENST00000575426 C3orf18Q9UK00 162 aa14.4□□□□□ -0.1
LITAF-217ENST00000575426 NBEAQ8NFP9 2946 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 SPAG7O75391 227 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 BMP10O95393 424 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 MLYCDO95822 493 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 TGFB1P01137 390 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 UMODP07911 640 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 SMIM10L1P0DMW3 83 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 TSPAN8P19075 237 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 MMP11P24347 488 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 HNRNPH1P31943 449 aaKnown RBP14.39□□□□□ -0.11
LITAF-217ENST00000575426 XCR1P46094 333 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 RAP1GDS1P52306 607 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 PLA2G16P53816 162 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 FOXL2P58012 376 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 ASPHQ12797 758 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 IFT88Q13099 833 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 ZRSR2Q15696 482 aaKnown RBP14.39□□□□□ -0.11
LITAF-217ENST00000575426 TMEM35AQ53FP2 167 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 CFAP157Q5JU67 520 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 BEND6Q5SZJ8 279 aaPredicted RBP14.39□□□□□ -0.11
LITAF-217ENST00000575426 MED25Q71SY5 747 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 RPS27LQ71UM5 84 aaKnown RBP14.39□□□□□ -0.11
LITAF-217ENST00000575426 PDSS2Q86YH6 399 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 OR4F6Q8NGB9 312 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 ADAMTS17Q8TE56 1095 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 TTC9Q92623 222 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 L3HYPDHQ96EM0 354 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 PEX11GQ96HA9 241 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 SMIM10Q96HG1 83 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 FER1L6-AS2Q96M78 137 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 TMEM237Q96Q45 408 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 F2RL3Q96RI0 385 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 MS4A8Q9BY19 250 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 ROGDIQ9GZN7 287 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 STMN4Q9H169 189 aaPredicted RBP14.39□□□□□ -0.11
LITAF-217ENST00000575426 ACSS2Q9NR19 701 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 ARGLU1Q9NWB6 273 aaPredicted RBP14.39□□□□□ -0.11
LITAF-217ENST00000575426 MKL2Q9ULH7 1088 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 PLLPQ9Y342 182 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 TSC22D4Q9Y3Q8 395 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 KCNMB2Q9Y691 235 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 MGAQ8IWI9 3026 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 MED13Q9UHV7 2174 aa14.39□□□□□ -0.11
LITAF-217ENST00000575426 LAMA5O15230 3695 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 A0A0G2JN53 185 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 GOLGA6L10A6NI86 522 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 ARGFXA6NJG6 315 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 IDSB3KWA1 339 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 G3V2L1 256 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 PSMD12O00232 456 aaPredicted RBP14.38□□□□□ -0.11
LITAF-217ENST00000575426 PCDH17O14917 1159 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 CHST10O43529 356 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 B3GALT2O43825 422 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 B3GALT4O96024 378 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 SFTPCP11686 197 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 PTX3P26022 381 aaPredicted RBP14.38□□□□□ -0.11
LITAF-217ENST00000575426 SNRPNP63162 240 aaKnown RBP14.38□□□□□ -0.11
LITAF-217ENST00000575426 TRAF3Q13114 568 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 ATP1A4Q13733 1029 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 AP5B1Q2VPB7 878 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 ADPRMQ3LIE5 342 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 MINDY4Q4G0A6 757 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 C10orf62Q5T681 223 aaPredicted RBP14.38□□□□□ -0.11
LITAF-217ENST00000575426 ADNP2Q6IQ32 1131 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 VN1R5Q7Z5H4 357 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 LAPTM4BQ86VI4 370 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 TMEM102Q8N9M5 508 aaPredicted RBP14.38□□□□□ -0.11
LITAF-217ENST00000575426 ARMC2Q8NEN0 867 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 MYRIPQ8NFW9 859 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 HUS1BQ8NHY5 278 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 SREK1Q8WXA9 508 aaKnown RBP14.38□□□□□ -0.11
LITAF-217ENST00000575426 METTL21AQ8WXB1 218 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 MTFMTQ96DP5 389 aaKnown RBP14.38□□□□□ -0.11
LITAF-217ENST00000575426 WBP1Q96G27 269 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 KCNC2Q96PR1 638 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 OR1F2PQ96R84 312 aa14.38□□□□□ -0.11
LITAF-217ENST00000575426 MTERF1Q99551 399 aaKnown RBP14.38□□□□□ -0.11
LITAF-217ENST00000575426 NPLQ9BXD5 320 aaPredicted RBP14.38□□□□□ -0.11
LITAF-217ENST00000575426 C12orf65Q9H3J6 166 aaKnown RBP14.38□□□□□ -0.11
LITAF-217ENST00000575426 ELOVL6Q9H5J4 265 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms