RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 PPP6CO00743 305 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 STX16O14662 325 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 CHST10O43529 356 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 CD63P08962 238 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 PIM1P11309 404 aaPredicted RBP8.17□□□□□ -1.1
SMG6-216ENST00000575176 SFTPCP11686 197 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 COL6A2P12110 1019 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 ACPPP15309 386 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 CERS1P27544 350 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 GSTM2P28161 218 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 TYK2P29597 1187 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 CCL11P51671 97 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 RAB8AP61006 207 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 EEF1A2Q05639 463 aaKnown RBP8.17□□□□□ -1.1
SMG6-216ENST00000575176 CHIT1Q13231 466 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 RUNX2Q13950 521 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 HERC3Q15034 1050 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 RASA2Q15283 850 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 RBBP7Q16576 425 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 PFKFB4Q16877 469 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 FAM83EQ2M2I3 478 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 TUBB8Q3ZCM7 444 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 TOR1AIP1Q5JTV8 583 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 VWA5B1Q5TIE3 1220 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 SLC6A19Q695T7 634 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 ABHD17CQ6PCB6 329 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 CLEC18BQ6UXF7 455 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 ASB18Q6ZVZ8 466 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 ANKRD37Q7Z713 158 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 TDRPQ86YL5 185 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 PTGR2Q8N8N7 351 aaPredicted RBP8.17□□□□□ -1.1
SMG6-216ENST00000575176 L3MBTL4Q8NA19 623 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 CLEC18CQ8NCF0 446 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 OR7G3Q8NG95 312 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 EPS8L3Q8TE67 593 aaKnown RBP8.17□□□□□ -1.1
SMG6-216ENST00000575176 TMEM237Q96Q45 408 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 BARD1Q99728 777 aaKnown RBP8.17□□□□□ -1.1
SMG6-216ENST00000575176 EFCAB11Q9BUY7 163 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 SLC25A23Q9BV35 468 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 TRIM4Q9C037 500 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 VPS11Q9H270 941 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 CNOT10Q9H9A5 744 aaKnown RBP8.17□□□□□ -1.1
SMG6-216ENST00000575176 ZNF160Q9HCG1 818 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 ACSS2Q9NR19 701 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 KCMF1Q9P0J7 381 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 TMEM216Q9P0N5 145 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 PSMC3IPQ9P2W1 217 aaPredicted RBP8.17□□□□□ -1.1
SMG6-216ENST00000575176 ZNF223Q9UK11 482 aaPredicted RBP8.17□□□□□ -1.1
SMG6-216ENST00000575176 CDC14AQ9UNH5 594 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 NTNG1Q9Y2I2 539 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 POLEQ07864 2286 aa8.17□□□□□ -1.1
SMG6-216ENST00000575176 IGHV3-20A0A0C4DH32 117 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 A0A1W2PPM1 405 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 TCRBV16S1A1N1A0A5B0 115 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 H0YIV9 168 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 CYR61O00622 381 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 NCKAP5O14513 1909 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 PRPF4O43172 522 aaKnown RBP eCLIP8.16□□□□□ -1.1
SMG6-216ENST00000575176 MAN1A2O60476 641 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 CCNT2O60583 730 aaKnown RBP8.16□□□□□ -1.1
SMG6-216ENST00000575176 CDC123O75794 336 aaPredicted RBP8.16□□□□□ -1.1
SMG6-216ENST00000575176 KRT38O76015 456 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 IGHEP01854 428 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 FHP07954 510 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 SNRPAP09012 282 aaKnown RBP8.16□□□□□ -1.1
SMG6-216ENST00000575176 NUDT17P0C025 328 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 PRR35P0CG20 571 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 GRK3P35626 688 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 HSD17B3P37058 310 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 MSH2P43246 934 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 AVPR1BP47901 424 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 PGDP52209 483 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 EMP2P54851 167 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 RRADP55042 308 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 BTG2P78543 158 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 TLE1Q04724 770 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 SRSF1Q07955 248 aaKnown RBP eCLIP8.16□□□□□ -1.1
SMG6-216ENST00000575176 AIMP2Q13155 320 aaKnown RBP8.16□□□□□ -1.1
SMG6-216ENST00000575176 GTF2H2Q13888 395 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 NDUFA9Q16795 377 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 GGTA1PQ4G0N0 100 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 XKR6Q5GH73 641 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 FAAH2Q6GMR7 532 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 GTF2H2CQ6P1K8 395 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 METTL2BQ6P1Q9 378 aaKnown RBP8.16□□□□□ -1.1
SMG6-216ENST00000575176 WDR93Q6P2C0 686 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 QSOX2Q6ZRP7 698 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 SNX31Q8N9S9 440 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 PLPP5Q8NEB5 264 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 NFAM1Q8NET5 270 aaPredicted RBP8.16□□□□□ -1.1
SMG6-216ENST00000575176 TRPV3Q8NET8 790 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 OR2L5Q8NG80 312 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 MIB2Q96AX9 1013 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 PEX11GQ96HA9 241 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 SORBS1Q9BX66 1292 aaKnown RBP8.16□□□□□ -1.1
SMG6-216ENST00000575176 MRPL46Q9H2W6 279 aaKnown RBP8.16□□□□□ -1.1
SMG6-216ENST00000575176 ANKHQ9HCJ1 492 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 DMRT3Q9NQL9 472 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 NECTIN3Q9NQS3 549 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 GPR83Q9NYM4 423 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms