RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 ASB12Q8WXK4 309 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 AP3S1Q92572 193 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 INPP5KQ9BT40 448 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 VN1R3Q9BXE9 311 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 DERL2Q9GZP9 239 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 CCSER2Q9H7U1 834 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 MRPS7Q9Y2R9 242 aaKnown RBP9.23□□□□□ -0.93
CCDC40-212ENST00000574799 PRR23D1E9PI22 279 aaPredicted RBP9.23□□□□□ -0.93
CCDC40-212ENST00000574799 CLIC1O00299 241 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 FABP7O15540 132 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 SSNA1O43805 119 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 CYP17A1P05093 508 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 RPS17P08708 135 aaKnown RBP9.23□□□□□ -0.93
CCDC40-212ENST00000574799 PRR23D2P0DMB1 279 aaPredicted RBP9.23□□□□□ -0.93
CCDC40-212ENST00000574799 PKMP14618 531 aaKnown RBP9.23□□□□□ -0.93
CCDC40-212ENST00000574799 ITGALP20701 1170 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 PTCHD3Q3KNS1 767 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 SDHAF4Q5VUM1 108 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 C22orf42Q6IC83 251 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 CASP12Q6UXS9 341 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 USP30Q70CQ3 517 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 TAS1R1Q7RTX1 841 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 HDDC2Q7Z4H3 204 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 GLT6D1Q7Z4J2 308 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 GDPD1Q8N9F7 314 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 B3GNT7Q8NFL0 401 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 APOLD1Q96LR9 279 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 QRFPRQ96P65 431 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 CASD1Q96PB1 797 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 C3orf14Q9HBI5 128 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 KLHL21Q9UJP4 597 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 NCKAP1Q9Y2A7 1128 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 GSTK1Q9Y2Q3 226 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 C2orf81A6NN90 581 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 TMEM189-UBE2V1I3L0A0 370 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 WWP2O00308 870 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 SLC28A1O00337 649 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 FPGTO14772 594 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 MAFKO60675 156 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 ENGP17813 658 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 KDELR2P33947 212 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 MAGEA11P43364 429 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 KIR2DL3P43628 341 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 KIR3DL1P43629 444 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 ITGA1P56199 1179 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 DCDC1P59894 354 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 EIF2B5Q13144 721 aaKnown RBP9.23□□□□□ -0.93
CCDC40-212ENST00000574799 CRTC2Q53ET0 693 aaPredicted RBP9.23□□□□□ -0.93
CCDC40-212ENST00000574799 RNASE12Q5GAN4 147 aaKnown RBP9.23□□□□□ -0.93
CCDC40-212ENST00000574799 FAM171A1Q5VUB5 890 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 OR4F3Q6IEY1 312 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 GLRX5Q86SX6 157 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 POP5Q969H6 163 aaKnown RBP9.23□□□□□ -0.93
CCDC40-212ENST00000574799 ASIC4Q96FT7 647 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 ZNF382Q96SR6 550 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 ERVMER34-1Q9H9K5 563 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 MRPL39Q9NYK5 338 aaKnown RBP9.23□□□□□ -0.93
CCDC40-212ENST00000574799 ADAM30Q9UKF2 790 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 KLK4Q9Y5K2 254 aa9.23□□□□□ -0.93
CCDC40-212ENST00000574799 ZNF106Q9H2Y7 1883 aaKnown RBP9.23□□□□□ -0.93
CCDC40-212ENST00000574799 FAM220BPB1ANY3 271 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 J3KR12 359 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 STX16O14662 325 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 FGF10O15520 208 aaPredicted RBP9.22□□□□□ -0.93
CCDC40-212ENST00000574799 IRAK2O43187 625 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 ESR1P03372 595 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 ODC1P11926 461 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 COX7A2P14406 83 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 CPN2P22792 545 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 GRK4P32298 578 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 ATP6V1E1P36543 226 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 TALDO1P37837 337 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 RGS4P49798 205 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 IRF3Q14653 427 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 STK40Q8N2I9 435 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 SLC5A8Q8N695 610 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 ZBTB44Q8NCP5 570 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 TTC9Q92623 222 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 NELL1Q92832 810 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 OTULINQ96BN8 352 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 OTUB1Q96FW1 271 aaPredicted RBP9.22□□□□□ -0.93
CCDC40-212ENST00000574799 TSGA13Q96PP4 275 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 PPA2Q9H2U2 334 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 DNAJC27Q9NZQ0 273 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 PCDHGA6Q9Y5G7 932 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 IQCF5A8MTL0 148 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 GJB3O75712 270 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 GPX5O75715 221 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 GLULP15104 373 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 TNFRSF1BP20333 461 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 APEX1P27695 318 aaKnown RBP9.22□□□□□ -0.93
CCDC40-212ENST00000574799 OR1E2P47887 323 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 SP3Q02447 781 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 SNTA1Q13424 505 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 GOLGA7Q7Z5G4 137 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 SYT12Q8IV01 421 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 METTL2AQ96IZ6 378 aaKnown RBP9.22□□□□□ -0.93
CCDC40-212ENST00000574799 C1QTNF7Q9BXJ2 289 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 GPR62Q9BZJ7 368 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 HEBP1Q9NRV9 189 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms