RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 EIF2S1P05198 315 aaKnown RBP5.19□□□□□ -1.58
SF3B3-214ENST00000572365 CELA2AP08217 269 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 HOXB5P09067 269 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 FAM200BP0CF97 657 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 H2AFXP16104 143 aaPredicted RBP5.19□□□□□ -1.58
SF3B3-214ENST00000572365 ALOX12P18054 663 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 HNRNPA2B1P22626 353 aaKnown RBP5.19□□□□□ -1.58
SF3B3-214ENST00000572365 MCM3P25205 808 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 NFKBIAP25963 317 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 PRPHP41219 470 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 MNAT1P51948 309 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 ZNF131P52739 623 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 OR1D5P58170 312 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 UBE2HP62256 183 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 ZFP36L1Q07352 338 aaKnown RBP5.19□□□□□ -1.58
SF3B3-214ENST00000572365 OVGP1Q12889 678 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 HSP90B2PQ58FF3 399 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 PIP5KL1Q5T9C9 394 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 NKAIN2Q5VXU1 208 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 KCTD16Q68DU8 428 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 NADSYN1Q6IA69 706 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 CYP20A1Q6UW02 462 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 C16orf54Q6UWD8 224 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 LINGO4Q6UY18 593 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 ZNF517Q6ZMY9 492 aaPredicted RBP5.19□□□□□ -1.58
SF3B3-214ENST00000572365 IKBIPQ70UQ0 350 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 TIPARPQ7Z3E1 657 aaKnown RBP5.19□□□□□ -1.58
SF3B3-214ENST00000572365 CCDC186Q7Z3E2 898 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 TRIM69Q86WT6 500 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 HORMAD1Q86X24 394 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 ANKRD13BQ86YJ7 626 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 CCDC13Q8IYE1 715 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 ARHGEF2Q92974 986 aaKnown RBP5.19□□□□□ -1.58
SF3B3-214ENST00000572365 COQ8BQ96D53 544 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 ZG16BQ96DA0 208 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 ACCSQ96QU6 501 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 CMKLR1Q99788 373 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 LRRC61Q9BV99 259 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 KRTAP9-8Q9BYQ0 159 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 B3GNT4Q9C0J1 378 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 HOMER3Q9NSC5 361 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 COMMD8Q9NX08 183 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 ODF2LQ9ULJ1 636 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 POLEQ07864 2286 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 DYTNA2CJ06 578 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 IGLON5A6NGN9 336 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 ZNF233A6NK53 670 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 A6NNC1 897 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 KCNU1A8MYU2 1149 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 ZNF814B7Z6K7 855 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 NPIPB11E5RHQ5 1161 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 MKRN2OSH3BPM6 223 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 IFNL4K9M1U5 179 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 B4GAT1O43505 415 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 LIASO43766 372 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 ZG16O60844 167 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 TFP02787 698 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 CTSLP07711 333 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 PNMA6AP0CW24 399 aaPredicted RBP5.18□□□□□ -1.58
SF3B3-214ENST00000572365 PCNAP12004 261 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 PDGFRAP16234 1089 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 SRD5A1P18405 259 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 CD58P19256 250 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 TCN2P20062 427 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 ALDH4A1P30038 563 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 RFC1P35251 1148 aaPredicted RBP5.18□□□□□ -1.58
SF3B3-214ENST00000572365 HMGA2P52926 109 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 HDAC4P56524 1084 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 YWHAGP61981 247 aaKnown RBP eCLIP5.18□□□□□ -1.58
SF3B3-214ENST00000572365 TMED1Q13445 227 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 E2F5Q15329 346 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 MED22Q15528 200 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 DPCR1Q3MIW9 517 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 FAM133BQ5BKY9 247 aaKnown RBP5.18□□□□□ -1.58
SF3B3-214ENST00000572365 LRRC73Q5JTD7 316 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 C10orf25Q5T742 122 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 HMBOX1Q6NT76 420 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 TTI2Q6NXR4 508 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 ABI3BPQ7Z7G0 1075 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 GPSM1Q86YR5 675 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 FAM217AQ8IXS0 508 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 GPD1LQ8N335 351 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 HORMAD2Q8N7B1 307 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 PDILTQ8N807 584 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 FIBINQ8TAL6 211 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 MIPOL1Q8TD10 442 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 DDB2Q92466 427 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 NAT6Q93015 286 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 SMARCE1Q969G3 411 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 RNF183Q96D59 192 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 C8orf76Q96K31 380 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 PRICKLE1Q96MT3 831 aaPredicted RBP5.18□□□□□ -1.58
SF3B3-214ENST00000572365 SLC17A9Q9BYT1 436 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 RAB34Q9BZG1 259 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 SYNCQ9H7C4 482 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 MVB12BQ9H7P6 319 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 CSNK1G1Q9HCP0 422 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 HAUS2Q9NVX0 235 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 SLC39A1Q9NY26 324 aa5.18□□□□□ -1.58
SF3B3-214ENST00000572365 TMEM9Q9P0T7 183 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms