RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 SOWAHCQ53LP3 525 aaPredicted RBP10.34□□□□□ -0.75
CCDC40-207ENST00000572253 THOC7Q6I9Y2 204 aaKnown RBP10.34□□□□□ -0.75
CCDC40-207ENST00000572253 TRAF7Q6Q0C0 670 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 DBF4BQ8NFT6 615 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 OR52N2Q8NGI0 321 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 NFKBIDQ8NI38 313 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 SETD6Q8TBK2 473 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 FOPNLQ96NB1 174 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 FAM129BQ96TA1 746 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 CDCA4Q9BXL8 241 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 CHST8Q9H2A9 424 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 RNF167Q9H6Y7 350 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 SMURF1Q9HCE7 757 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 RLIMQ9NVW2 624 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 SPATA7Q9P0W8 599 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 CAB39Q9Y376 341 aaPredicted RBP10.34□□□□□ -0.75
CCDC40-207ENST00000572253 FAM172BPA6NC97 362 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 FADS2P1A8MWK0 482 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 E7EQ34 232 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 YY2O15391 372 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 DNTTP04053 509 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 ETFAP13804 333 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 POU2F1P14859 743 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 RCVRNP35243 200 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 IRF3Q14653 427 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 STARD3Q14849 445 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 ZNF630Q2M218 657 aaPredicted RBP10.34□□□□□ -0.75
CCDC40-207ENST00000572253 TPGS2Q68CL5 300 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 AGTRAPQ6RW13 159 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 CCDC190Q86UF4 302 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 TMEM173Q86WV6 379 aaPredicted RBP10.34□□□□□ -0.75
CCDC40-207ENST00000572253 RAB43Q86YS6 212 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 CYP4Z2PQ8N1L4 340 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 ARL14EPQ8N8R7 260 aaPredicted RBP10.34□□□□□ -0.75
CCDC40-207ENST00000572253 OR4C15Q8NGM1 316 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 ZNF461Q8TAF7 563 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 TMEM159Q96B96 161 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 COQ8BQ96D53 544 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 NIPSNAP1Q9BPW8 284 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 ZDHHC6Q9H6R6 413 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 TMCC3Q9ULS5 477 aa10.34□□□□□ -0.75
CCDC40-207ENST00000572253 QSOX1O00391 747 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 SELPP16109 830 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 CTGFP29279 349 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 SOAT1P35610 550 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 CDK6Q00534 326 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 LMAN2Q12907 356 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 SF1Q15637 639 aaKnown RBP10.33□□□□□ -0.76
CCDC40-207ENST00000572253 MPPE1Q53F39 396 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 C6orf183Q5T699 404 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 TMC5Q6UXY8 1006 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 FAM92BQ6ZTR7 304 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 BBS7Q8IWZ6 715 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 OR9Q2Q8NGE9 314 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 PPCDCQ96CD2 204 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 REEP4Q9H6H4 257 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 C3orf14Q9HBI5 128 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 KCNE2Q9Y6J6 123 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 AP2A2O94973 939 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 GSTM1P09488 218 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 SPINT3P49223 89 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 EPHB3P54753 998 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 POLR2LP62875 67 aaKnown RBP10.33□□□□□ -0.76
CCDC40-207ENST00000572253 FOXD4Q12950 439 aaPredicted RBP10.33□□□□□ -0.76
CCDC40-207ENST00000572253 DGKKQ5KSL6 1271 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 PLAG1Q6DJT9 500 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 MED27Q6P2C8 311 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 CELF2-AS1Q8N7Q2 184 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 AQP11Q8NBQ7 271 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 TRNT1Q96Q11 434 aaKnown RBP10.33□□□□□ -0.76
CCDC40-207ENST00000572253 RACGAP1Q9H0H5 632 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 TPK1Q9H3S4 243 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 C14orf119Q9NWQ9 140 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 A0A1W2PQ67 120 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 IFNW1P05000 195 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 CD22P20273 847 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 CRISP1P54107 249 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 PTSQ03393 145 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 PTGES3Q15185 160 aaKnown RBP10.33□□□□□ -0.76
CCDC40-207ENST00000572253 ZFP69Q49AA0 526 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 SERPINA13PQ6UXR4 307 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 TMPRSS11AQ6ZMR5 421 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 RFLNAQ6ZTI6 216 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 DNAJB7Q7Z6W7 309 aaPredicted RBP10.33□□□□□ -0.76
CCDC40-207ENST00000572253 RNF130Q86XS8 419 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 FAM46DQ8NEK8 389 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 IL17RDQ8NFM7 739 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 TIFAQ96CG3 184 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 SYT17Q9BSW7 474 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 CNPPD1Q9BV87 410 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 TMEM184CQ9NVA4 438 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 CD84Q9UIB8 345 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 RAB23Q9ULC3 237 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 KRT87PA6NCN2 255 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 CENPXA8MT69 81 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 RGS13O14921 159 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 C6orf47O95873 294 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 GABRB1P18505 474 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 CA8P35219 290 aa10.33□□□□□ -0.76
CCDC40-207ENST00000572253 CRYBA2P53672 197 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms