RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 SNRNP200O75643 2136 aaKnown RBP6.42□□□□□ -1.38
CHD3-213ENST00000571249 SMNDC1O75940 238 aaKnown RBP eCLIP6.42□□□□□ -1.38
CHD3-213ENST00000571249 VENTXO95231 258 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 FTCDO95954 541 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 EIF2S1P05198 315 aaKnown RBP6.42□□□□□ -1.38
CHD3-213ENST00000571249 HLA-DQB2P05538 268 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 MMP2P08253 660 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 FAM157BP0CG42 384 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 TPBGLP0DKB5 382 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 MYBL1P10243 752 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 TPH1P17752 444 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 CCND1P24385 295 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 PDHA2P29803 388 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 CASP9P55211 416 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 TAS2R50P59544 299 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 PPIAP62937 165 aaKnown RBP6.42□□□□□ -1.38
CHD3-213ENST00000571249 OCRLQ01968 901 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 OGDHQ02218 1023 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 KIR2DS3Q14952 304 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 TMEM95Q3KNT9 176 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 MINDY4Q4G0A6 757 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 BEND6Q5SZJ8 279 aaPredicted RBP6.42□□□□□ -1.38
CHD3-213ENST00000571249 ABHD17CQ6PCB6 329 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 FAM151BQ6UXP7 276 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 PLEKHM3Q6ZWE6 761 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 PEX26Q7Z412 305 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 RPS19BP1Q86WX3 136 aaKnown RBP6.42□□□□□ -1.38
CHD3-213ENST00000571249 PHF13Q86YI8 300 aaPredicted RBP6.42□□□□□ -1.38
CHD3-213ENST00000571249 ZC3H7AQ8IWR0 971 aaKnown RBP6.42□□□□□ -1.38
CHD3-213ENST00000571249 LINC00528Q8N1L1 170 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 EIF1ADQ8N9N8 165 aaKnown RBP6.42□□□□□ -1.38
CHD3-213ENST00000571249 TNIP2Q8NFZ5 429 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 OR5AR1Q8NGP9 310 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 HM13Q8TCT9 377 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 TFGQ92734 400 aaPredicted RBP6.42□□□□□ -1.38
CHD3-213ENST00000571249 TRIM11Q96F44 468 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 PIK3IP1Q96FE7 263 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 CAPZA3Q96KX2 299 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 DHRS1Q96LJ7 313 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 LINC00615Q96LM1 132 aaPredicted RBP6.42□□□□□ -1.38
CHD3-213ENST00000571249 OR52A5Q9H2C5 316 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 TRIM45Q9H8W5 580 aaPredicted RBP6.42□□□□□ -1.38
CHD3-213ENST00000571249 MMP25Q9NPA2 562 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 OR6C2Q9NZP2 312 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 ADAM22Q9P0K1 906 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.42□□□□□ -1.38
CHD3-213ENST00000571249 IP6K2Q9UHH9 426 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 TAGLN3Q9UI15 199 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 AMFRQ9UKV5 643 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 PLAGL1Q9UM63 463 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 TDRKHQ9Y2W6 561 aaKnown RBP6.42□□□□□ -1.38
CHD3-213ENST00000571249 PCDHGB1Q9Y5G3 927 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 SPO11Q9Y5K1 396 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 WIF1Q9Y5W5 379 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 YLPM1P49750 1951 aaKnown RBP6.42□□□□□ -1.38
CHD3-213ENST00000571249 DYNC2H1Q8NCM8 4307 aaKnown RBP6.41□□□□□ -1.38
CHD3-213ENST00000571249 RAI1Q7Z5J4 1906 aaPredicted RBP6.41□□□□□ -1.38
CHD3-213ENST00000571249 A0A096LNT2 108 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 PINLYPA6NC86 204 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 H3BRJ5 948 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 UBFD1O14562 309 aaKnown RBP6.41□□□□□ -1.38
CHD3-213ENST00000571249 MATN3O15232 486 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 SGTAO43765 313 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 LMX1BO60663 402 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 SRPX2O60687 465 aaPredicted RBP6.41□□□□□ -1.38
CHD3-213ENST00000571249 GHRHP01286 108 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 DESP17661 470 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 CTNNA2P26232 953 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 CD151P48509 253 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 HLCSP50747 726 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 VSNL1P62760 191 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 ACTG1P63261 375 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 PLGLB1Q02325 96 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 EXT1Q16394 746 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 SYT16Q17RD7 645 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 MUM1Q2TAK8 710 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 BCL7AQ4VC05 210 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 WLSQ5T9L3 541 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 FRMPD2BQ6IN97 320 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 CCDC70Q6NSX1 233 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 DNAJC24Q6P3W2 148 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 UBE2R2Q712K3 238 aaPredicted RBP6.41□□□□□ -1.38
CHD3-213ENST00000571249 TRILQ7L0X0 811 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 MON1BQ7L1V2 547 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 OTOAQ7RTW8 1153 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 HDXQ7Z353 690 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 PCGF5Q86SE9 256 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 MCOLN2Q8IZK6 566 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 AMER3Q8N944 861 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 OR2W6PQ8NHA6 318 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 TMEM171Q8WVE6 324 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.41□□□□□ -1.38
CHD3-213ENST00000571249 MAML1Q92585 1016 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 GCDHQ92947 438 aaPredicted RBP6.41□□□□□ -1.38
CHD3-213ENST00000571249 PPP1R14AQ96A00 147 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 ISL2Q96A47 359 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 CABS1Q96KC9 395 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 C10orf90Q96M02 699 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 TRIB3Q96RU7 358 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 CYTH2Q99418 400 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms