RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 UNKQ9C0B0 810 aaKnown RBP11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 DERL2Q9GZP9 239 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 RAB17Q9H0T7 212 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 SMYD2Q9NRG4 433 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 LANCL2Q9NS86 450 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 WWOXQ9NZC7 414 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 GRHL1Q9NZI5 618 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 ABI3Q9P2A4 366 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 FAM159BA6NKW6 160 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 PHGDHO43175 533 aaKnown RBP11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 CHST10O43529 356 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 B3GALT4O96024 378 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 LDLRP01130 860 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 GSTA2P09210 222 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 STMN1P16949 149 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 SLC6A12P48065 614 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 OR4D2P58180 307 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 RAB8AP61006 207 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 CAV1Q03135 178 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 TGFBIQ15582 683 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 C4orf17Q53FE4 359 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 C3orf62Q6ZUJ4 267 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 CCDC25Q86WR0 208 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 GPSM1Q86YR5 675 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 CTAGE3PQ8IX95 158 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 TCAIMQ8N3R3 496 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 SLC5A8Q8N695 610 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 ANKRD53Q8N9V6 530 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 PLPP5Q8NEB5 264 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 TTLQ8NG68 377 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 RHBDF1Q96CC6 855 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 ZNF354BQ96LW1 612 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 GPR22Q99680 433 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 RBBP8Q99708 897 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 PHACTR1Q9C0D0 580 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 CNOT10Q9H9A5 744 aaKnown RBP11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 CAB39LQ9H9S4 337 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 CLK4Q9HAZ1 481 aaKnown RBP11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 KCNK13Q9HB14 408 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 STMN3Q9NZ72 180 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 OSGIN2Q9Y236 505 aa11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 MTO1Q9Y2Z2 717 aaKnown RBP11.63□□□□□ -0.55
CTDNEP1-205ENST00000570828 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.63□□□□□ -0.551e-7■□□□□ 8.6
CTDNEP1-205ENST00000570828 HIVEP3Q5T1R4 2406 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 NOTCH2Q04721 2471 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 CTAGE15A4D2H0 777 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 CXorf49A8MYA2 514 aaPredicted RBP11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 PRMT3O60678 531 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 PRAMEF2O60811 474 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 B4GALT2O60909 372 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 H2AFYO75367 372 aaKnown RBP11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 S100BP04271 92 aaPredicted RBP11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 SERPINA6P08185 405 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 CCDC166P0CW27 439 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 RNH1P13489 461 aaKnown RBP11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 STX2P32856 288 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 GDF5P43026 501 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 PLTPP55058 493 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 PER3P56645 1201 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 TAS2R50P59544 299 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 ATP6V0D1P61421 351 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 STXBP1P61764 594 aaKnown RBP11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 ETF1P62495 437 aaKnown RBP11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 SLBPQ14493 270 aaKnown RBP eCLIP11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 SLMAPQ14BN4 828 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 MEP1AQ16819 746 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 C18orf21Q32NC0 220 aaPredicted RBP11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 TOR1AIP1Q5JTV8 583 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 ACER2Q5QJU3 275 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 FCRLBQ6BAA4 426 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 TMIGD1Q6UXZ0 262 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 SYT10Q6XYQ8 523 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 SLCO4C1Q6ZQN7 724 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 CYS1Q717R9 158 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 TRIM46Q7Z4K8 759 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 CTAGE6Q86UF2 777 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 KLHDC8AQ8IYD2 350 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 BEST3Q8N1M1 668 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 KRT78Q8N1N4 520 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 C17orf53Q8N3J3 647 aaPredicted RBP11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 SPATA6LQ8N4H0 392 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 AMER2Q8N7J2 671 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 M1APQ8TC57 530 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 CCT6BQ92526 530 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 CAPS2Q9BXY5 557 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 MMP25Q9NPA2 562 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 GPRC5BQ9NZH0 403 aa11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 MDC1Q14676 2089 aaKnown RBP11.62□□□□□ -0.55
CTDNEP1-205ENST00000570828 DOCK10Q96BY6 2186 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 A0A088AWK7 358 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 WIPF3A6NGB9 483 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 RASAL1O95294 804 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 WISP3O95389 354 aaPredicted RBP11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 CRYABP02511 175 aaKnown RBP11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 C1GALT1C1LP0DN25 315 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 CD1DP15813 335 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 ZNF10P21506 573 aaPredicted RBP11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 GSTM2P28161 218 aa11.61□□□□□ -0.55
CTDNEP1-205ENST00000570828 HPDP32754 393 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms