RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 SHKBP1Q8TBC3 707 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 RAB40AQ8WXH6 277 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 L3HYPDHQ96EM0 354 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 SPIN2AQ99865 258 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 SPIN2BQ9BPZ2 258 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 MAGEH1Q9H213 219 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 ELAC1Q9H777 363 aaKnown RBP6.89□□□□□ -1.31
CNOT1-216ENST00000569240 AAASQ9NRG9 546 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 C14orf119Q9NWQ9 140 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 SH2B3Q9UQQ2 575 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 KIF20BQ96Q89 1820 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 LACTBL1A8MY62 500 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 CYP2B6P20813 491 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 KDELR2P33947 212 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 IGFALSP35858 605 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 BAG6P46379 1132 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 SPP2Q13103 211 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 BOP1Q14137 746 aaKnown RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 OPCMLQ14982 345 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 PAFAH1B3Q15102 231 aaKnown RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 XKR4Q5GH76 650 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 BEND4Q6ZU67 534 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 TMCO2Q7Z6W1 182 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 PIGZQ86VD9 579 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 C17orf64Q86WR6 236 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 TMEM185AQ8NFB2 350 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 OR10R2Q8NGX6 335 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 JOSD2Q8TAC2 188 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 MALSU1Q96EH3 234 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 RAB11FIP5Q9BXF6 653 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 CARS2Q9HA77 564 aaKnown RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 CHRAC1Q9NRG0 131 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 SDR39U1Q9NRG7 319 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 TMLHEQ9NVH6 421 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 TEX10Q9NXF1 929 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 TRBC2A0A5B9 178 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 OR6C65A6NJZ3 312 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 H7C417 338 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 CLLU1Q5K131 121 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 RTL6Q6ICC9 239 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 PDE12Q6L8Q7 609 aaKnown RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 TRMT10BQ6PF06 316 aaKnown RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 CLRN3Q8NCR9 226 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 MYLIPQ8WY64 445 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 ACO2Q99798 780 aaKnown RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 SGK2Q9HBY8 427 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 MKKSQ9NPJ1 570 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 ICKQ9UPZ9 632 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 GGT3PA6NGU5 568 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 SLC16A6O15403 523 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 SDC3O75056 442 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 SLC25A12O75746 678 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 ASGR1P07306 291 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 HDCP19113 662 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 EFNA1P20827 205 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 GGT2P36268 569 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 DLSTP36957 453 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 CAP2P40123 477 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 MAP3K8P41279 467 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 MTNR1AP48039 350 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 CACNB3P54284 484 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 RAB40BQ12829 278 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 RIN1Q13671 783 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 REEP3Q6NUK4 255 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 RHOUQ7L0Q8 258 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 LYSMD3Q7Z3D4 306 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 PXKQ7Z7A4 578 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 ZFAND4Q86XD8 727 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 LYSMD2Q8IV50 215 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 LRRC56Q8IYG6 542 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 ADGRG5Q8IZF4 528 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 TMEM203Q969S6 136 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 LRCH3Q96II8 777 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 PRMT6Q96LA8 375 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 RBCK1Q9BYM8 510 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 OSBPL2Q9H1P3 480 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 SACM1LQ9NTJ5 587 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 GMPR2Q9P2T1 348 aaKnown RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 DPP7Q9UHL4 492 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 A0A1W2PRB8 838 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 IFNA5P01569 189 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 IVDP26440 423 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 MC4RP32245 332 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 WNT4P56705 351 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 HSPA14Q0VDF9 509 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 MAD2L1BPQ15013 274 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 CYBRD1Q53TN4 286 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 TMEM198Q66K66 360 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 FAM171BQ6P995 826 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 MBOAT1Q6ZNC8 495 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 BRINP3Q76B58 766 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 RASGRP3Q8IV61 690 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 KLHDC8BQ8IXV7 354 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 CADM3Q8N126 398 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 CHST4Q8NCG5 386 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF514Q96K75 400 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-216ENST00000569240 FBXL4Q9UKA2 621 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 NPEPPSL1A6NEC2 478 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 PPP1R2P9O14990 202 aa6.88□□□□□ -1.31
CNOT1-216ENST00000569240 EEF1E1O43324 174 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms