RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 SCN2BO60939 215 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 C6orf47O95873 294 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 WNT1P04628 370 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 FURINP09958 794 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 TYRP1P17643 537 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 HRH2P25021 359 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 GCKP35557 465 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 TRPC1P48995 793 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 RAB8AP61006 207 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 HHEXQ03014 270 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 SLC14A1Q13336 389 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 SPATS1Q496A3 300 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 LRIF1Q5T3J3 769 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 ANXA8L1Q5VT79 327 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 ZCCHC8Q6NZY4 707 aaKnown RBP6.75□□□□□ -1.33
SMG1-215ENST00000568239 TSSK4Q6SA08 328 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 NUDT13Q86X67 352 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 PTRH1Q86Y79 214 aaKnown RBP6.75□□□□□ -1.33
SMG1-215ENST00000568239 TTLQ8NG68 377 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 LMX1AQ8TE12 382 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 ZDHHC1Q8WTX9 485 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 SPACA7Q96KW9 195 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 RNF145Q96MT1 663 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 ORAI3Q9BRQ5 295 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 CHRDQ9H2X0 955 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 HRASLS2Q9NWW9 162 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 SNX7Q9UNH6 387 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 MAPRE3Q9UPY8 281 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 EXO1Q9UQ84 846 aaKnown RBP6.75□□□□□ -1.33
SMG1-215ENST00000568239 ERVK-11Q9UQG0 969 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 LRRC42Q9Y546 428 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 PCDHB3Q9Y5E6 796 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 SNX8Q9Y5X2 465 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 LRIT2A6NDA9 550 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 SDC3O75056 442 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 CLEC3AO75596 197 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 SOAT1P35610 550 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 BSGP35613 385 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 NUDT1P36639 197 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 AQP4P55087 323 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 HBA1P69905 142 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 HEPACAMQ14CZ8 416 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 SFT2D3Q587I9 215 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 MTX3Q5HYI7 312 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 GPR153Q6NV75 609 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 AMER3Q8N944 861 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 TNIP2Q8NFZ5 429 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 OR5AK3PQ8NH89 298 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 EXOSC8Q96B26 276 aaKnown RBP6.74□□□□□ -1.33
SMG1-215ENST00000568239 ZNF570Q96NI8 536 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 QRFPRQ96P65 431 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 CPPED1Q9BRF8 314 aaPredicted RBP6.74□□□□□ -1.33
SMG1-215ENST00000568239 LRRC61Q9BV99 259 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 SLC6A16Q9GZN6 736 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 PITHD1Q9GZP4 211 aaPredicted RBP6.74□□□□□ -1.33
SMG1-215ENST00000568239 ABCG4Q9H172 646 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 MUC13Q9H3R2 512 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 TPT1P8Q9HAU6 139 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 MYNNQ9NPC7 610 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 CCM2LQ9NUG4 571 aaPredicted RBP6.74□□□□□ -1.33
SMG1-215ENST00000568239 POT1Q9NUX5 634 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 ACTR10Q9NZ32 417 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 RIMS3Q9UJD0 308 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 ANAPC2Q9UJX6 822 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 TSC22D4Q9Y3Q8 395 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 DTNAQ9Y4J8 743 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 LRP4O75096 1905 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 TRBV5-3A0A0A0MS03 114 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 GLOD5A6NK44 160 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 TLR4O00206 839 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 CXCR6O00574 342 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 TMPRSS11DO60235 418 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 KLHL18O94889 574 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 SEMA3DO95025 777 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 EIF2S1P05198 315 aaKnown RBP6.74□□□□□ -1.33
SMG1-215ENST00000568239 ANXA6P08133 673 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 PVRP15151 417 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 UGT2B7P16662 529 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 GGT1P19440 569 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 BCKDHBP21953 392 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 PTPN6P29350 595 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 SERPINB1P30740 379 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 RPL3P39023 403 aaKnown RBP6.74□□□□□ -1.33
SMG1-215ENST00000568239 CSNK1EP49674 416 aaKnown RBP6.74□□□□□ -1.33
SMG1-215ENST00000568239 NRF1Q16656 503 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 TOR1AIP1Q5JTV8 583 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 PRPF38BQ5VTL8 546 aaKnown RBP6.74□□□□□ -1.33
SMG1-215ENST00000568239 OR4C11Q6IEV9 310 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 FAM71E1Q6IPT2 247 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 MSANTD1Q6ZTZ1 278 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 DGLUCYQ7Z3D6 616 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 MFSD2AQ8NA29 543 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 ZNF548Q8NEK5 533 aaPredicted RBP6.74□□□□□ -1.33
SMG1-215ENST00000568239 OR8K5Q8NH50 307 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.74□□□□□ -1.33
SMG1-215ENST00000568239 CREB3L4Q8TEY5 395 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 COQ8BQ96D53 544 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 CIB1Q99828 191 aa6.74□□□□□ -1.33
SMG1-215ENST00000568239 DPH2Q9BQC3 489 aaPredicted RBP6.74□□□□□ -1.33
SMG1-215ENST00000568239 ZNF717Q9BY31 904 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms