RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 SLC39A11Q8N1S5 342 aa5.25□□□□□ -1.57
LINC01541-202ENST00000568095 ZNF557Q8N988 423 aaPredicted RBP5.25□□□□□ -1.57
LINC01541-202ENST00000568095 OR52B6Q8NGF0 335 aa5.25□□□□□ -1.57
LINC01541-202ENST00000568095 BRSK1Q8TDC3 778 aa5.25□□□□□ -1.57
LINC01541-202ENST00000568095 C7orf34Q96L11 122 aa5.25□□□□□ -1.57
LINC01541-202ENST00000568095 MAGEB10Q96LZ2 347 aaPredicted RBP5.25□□□□□ -1.57
LINC01541-202ENST00000568095 PPP3R2Q96LZ3 170 aa5.25□□□□□ -1.57
LINC01541-202ENST00000568095 ZNF578Q96N58 590 aaPredicted RBP5.25□□□□□ -1.57
LINC01541-202ENST00000568095 KCNS3Q9BQ31 491 aa5.25□□□□□ -1.57
LINC01541-202ENST00000568095 ULBP1Q9BZM6 244 aa5.25□□□□□ -1.57
LINC01541-202ENST00000568095 ATXN3LQ9H3M9 355 aa5.25□□□□□ -1.57
LINC01541-202ENST00000568095 IL23AQ9NPF7 189 aa5.25□□□□□ -1.57
LINC01541-202ENST00000568095 ABCB8Q9NUT2 735 aa5.25□□□□□ -1.57
LINC01541-202ENST00000568095 DDIT4Q9NX09 232 aa5.25□□□□□ -1.57
LINC01541-202ENST00000568095 SH3BP4Q9P0V3 963 aa5.25□□□□□ -1.57
LINC01541-202ENST00000568095 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.25□□□□□ -1.57
LINC01541-202ENST00000568095 SLC23A1Q9UHI7 598 aa5.25□□□□□ -1.57
LINC01541-202ENST00000568095 POLR3HQ9Y535 204 aaPredicted RBP5.25□□□□□ -1.57
LINC01541-202ENST00000568095 CFAP20Q9Y6A4 193 aaKnown RBP5.25□□□□□ -1.57
LINC01541-202ENST00000568095 KIAA1549LQ6ZVL6 1849 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 ZNF670-ZNF695F2Z2N8 137 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 CYP7B1O75881 506 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 SLC22A5O76082 557 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 GLP2RO95838 553 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 SCG5P05408 212 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 FABP3P05413 133 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 STSP08842 583 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 ZDHHC11BP0C7U3 371 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 PIPP12273 146 aaPredicted RBP5.24□□□□□ -1.57
LINC01541-202ENST00000568095 CSF2RAP15509 400 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 CRYBB2P43320 205 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 SLC9A3P48764 834 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 RABGGTBP53611 331 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 PER3P56645 1201 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 CLDN20P56880 219 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 SNTA1Q13424 505 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 LAPTM4AQ15012 233 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 ABRAXAS2Q15018 415 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 C21orf62-AS1Q17RA5 79 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 AP5B1Q2VPB7 878 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 BTBD16Q32M84 506 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 GTDC1Q4AE62 458 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 SLC39A12Q504Y0 691 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 USP39Q53GS9 565 aaKnown RBP5.24□□□□□ -1.57
LINC01541-202ENST00000568095 TM4SF20Q53R12 229 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 PXDC1Q5TGL8 231 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 IL31Q6EBC2 164 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 TMPRSS11AQ6ZMR5 421 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 AMIGO1Q86WK6 493 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.24□□□□□ -1.57
LINC01541-202ENST00000568095 LAX1Q8IWV1 398 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 PHACTR4Q8IZ21 702 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 NKAPQ8N5F7 415 aaKnown RBP5.24□□□□□ -1.57
LINC01541-202ENST00000568095 TEX19Q8NA77 164 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 OR10Z1Q8NGY1 313 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 METTL2AQ96IZ6 378 aaKnown RBP5.24□□□□□ -1.57
LINC01541-202ENST00000568095 CEP19Q96LK0 163 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 OPALINQ96PE5 141 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 MYOCQ99972 504 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 MARVELD1Q9BSK0 173 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 TTPALQ9BTX7 342 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 ACAT2Q9BWD1 397 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 HDHD5Q9BXW7 423 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 SLC7A5P2Q9GIP4 190 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 SYNDIG1Q9H7V2 258 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 HEXA-AS1Q9H8Q6 139 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 HHATLQ9HCP6 504 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 FZD3Q9NPG1 666 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 TMEM39AQ9NV64 488 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 STOML2Q9UJZ1 356 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 TMCC3Q9ULS5 477 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 CMAHPQ9Y471 501 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 BACE2Q9Y5Z0 518 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 RNF215Q9Y6U7 377 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 MTMR11A4FU01 709 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 SH3D21A4FU49 640 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 GFRA2O00451 464 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 EFCAB14O75071 495 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 RPP40O75818 363 aaKnown RBP5.24□□□□□ -1.57
LINC01541-202ENST00000568095 ABLIM3O94929 683 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 VIPP01282 170 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 ESR1P03372 595 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 DDX5P17844 614 aaKnown RBP5.24□□□□□ -1.57
LINC01541-202ENST00000568095 RORCP51449 518 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 MAPK12P53778 367 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 MAP3K7CLP57077 242 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 RHAGQ02094 409 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 MAD2L1Q13257 205 aaPredicted RBP5.24□□□□□ -1.57
LINC01541-202ENST00000568095 RBBP7Q16576 425 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 FAM174BQ3ZCQ3 159 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 SPANXN4Q5MJ08 99 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 MRNIPQ6NTE8 343 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 MSANTD2Q6P1R3 559 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 ERICH5Q6P6B1 374 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 TEX261Q6UWH6 196 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 MSANTD1Q6ZTZ1 278 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 EIF3MQ7L2H7 374 aaKnown RBP5.24□□□□□ -1.57
LINC01541-202ENST00000568095 TSEN54Q7Z6J9 526 aaKnown RBP5.24□□□□□ -1.57
LINC01541-202ENST00000568095 SCD5Q86SK9 330 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 GPAT4Q86UL3 456 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms