RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	GSX2	Q9BZM3	304 aa		12.76	□□□□□ -0.37
SMG1-213	ENST00000567737	ABCF3	Q9NUQ8	709 aa		12.76	□□□□□ -0.37
SMG1-213	ENST00000567737	SPTLC3	Q9NUV7	552 aa		12.76	□□□□□ -0.37
SMG1-213	ENST00000567737	SPRR3	Q9UBC9	169 aa		12.76	□□□□□ -0.37
SMG1-213	ENST00000567737	NAALAD2	Q9Y3Q0	740 aa		12.76	□□□□□ -0.37
SMG1-213	ENST00000567737	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	12.76	□□□□□ -0.37
SMG1-213	ENST00000567737	CUBN	O60494	3623 aa		12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	ZNF839	A8K0R7	811 aa		12.75	□□□□□ -0.37
SMG1-213	ENST00000567737		A8MUA0	341 aa		12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	KPNA5	O15131	536 aa		12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	B4GALT2	O60909	372 aa		12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	ENDOU	P21128	410 aa	Known RBP	12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	CNR1	P21554	472 aa		12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	TIMP3	P35625	211 aa		12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	PTH2R	P49190	550 aa		12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	ZNF136	P52737	540 aa		12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	RPS15A	P62244	130 aa	Known RBP	12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	ARHGAP19	Q14CB8	494 aa		12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	SIX1	Q15475	284 aa	Predicted RBP	12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	ACKR1	Q16570	336 aa		12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	KRTAP24-1	Q3LI83	254 aa		12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	ANKRD20A4	Q4UJ75	823 aa		12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	C10orf62	Q5T681	223 aa	Predicted RBP	12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	PTRHD1	Q6GMV3	140 aa	Known RBP	12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	FAM47E	Q6ZV65	393 aa		12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	OTOA	Q7RTW8	1153 aa		12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	VN1R4	Q7Z5H5	301 aa		12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	APCDD1L	Q8NCL9	501 aa		12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	ANP32E	Q9BTT0	268 aa		12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	EPB41L4B	Q9H329	900 aa		12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	UBTD1	Q9HAC8	227 aa		12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	TRMT1	Q9NXH9	659 aa	Known RBP	12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	NPFFR2	Q9Y5X5	522 aa		12.75	□□□□□ -0.37
SMG1-213	ENST00000567737	MROH6	A6NGR9	719 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	AHRR	A9YTQ3	701 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737		H7BY64	318 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	TLX2	O43763	284 aa	Predicted RBP	12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	EPPIN	O95925	133 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	GOT2	P00505	430 aa	Known RBP	12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	PSMA3	P25788	255 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	CTNNA2	P26232	953 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	HSD17B2	P37059	387 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	PNLIPRP1	P54315	467 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	WNT3	P56703	355 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	HYAL4	Q2M3T9	481 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	QSOX2	Q6ZRP7	698 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	LACC1	Q8IV20	430 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	KCT2	Q8NC54	265 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	B3GNT7	Q8NFL0	401 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	OR5T3	Q8NGG3	340 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	PPP1R14C	Q8TAE6	165 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	HSPBAP1	Q96EW2	488 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	PRAP1	Q96NZ9	151 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	PANX2	Q96RD6	677 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	CCDC77	Q9BR77	488 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	PACSIN1	Q9BY11	444 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	AMBRA1	Q9C0C7	1298 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	HSD3B7	Q9H2F3	369 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	YAE1D1	Q9NRH1	226 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	SAMD15	Q9P1V8	674 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	R3HDM2	Q9Y2K5	976 aa	Known RBP	12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	ANK3	Q12955	4377 aa	Known RBP	12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	ANK2	Q01484	3957 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	ARHGAP21	Q5T5U3	1957 aa		12.74	□□□□□ -0.37
SMG1-213	ENST00000567737	KCNE1B	A0A087WTH5	132 aa		12.73	□□□□□ -0.37
SMG1-213	ENST00000567737	PRMT5	O14744	637 aa	Predicted RBP	12.73	□□□□□ -0.37
SMG1-213	ENST00000567737	OR6B1	O95007	311 aa		12.73	□□□□□ -0.37
SMG1-213	ENST00000567737	OPRM1	P35372	400 aa		12.73	□□□□□ -0.37
SMG1-213	ENST00000567737	AGFG1	P52594	562 aa	Known RBP	12.73	□□□□□ -0.37
SMG1-213	ENST00000567737	HYAL2	Q12891	473 aa		12.73	□□□□□ -0.37
SMG1-213	ENST00000567737	ACSF3	Q4G176	576 aa	Predicted RBP	12.73	□□□□□ -0.37
SMG1-213	ENST00000567737	FASTKD1	Q53R41	847 aa	Known RBP	12.73	□□□□□ -0.37
SMG1-213	ENST00000567737	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	12.73	□□□□□ -0.37
SMG1-213	ENST00000567737	THEMIS2	Q5TEJ8	643 aa		12.73	□□□□□ -0.37
SMG1-213	ENST00000567737	C20orf204	Q6ZNR8	217 aa		12.73	□□□□□ -0.37
SMG1-213	ENST00000567737	CDKL3	Q8IVW4	592 aa	Predicted RBP	12.73	□□□□□ -0.37
SMG1-213	ENST00000567737	PPFIBP2	Q8ND30	876 aa		12.73	□□□□□ -0.37
SMG1-213	ENST00000567737	VMP1	Q96GC9	406 aa		12.73	□□□□□ -0.37
SMG1-213	ENST00000567737	CCDC138	Q96M89	665 aa		12.73	□□□□□ -0.37
SMG1-213	ENST00000567737	PIH1D1	Q9NWS0	290 aa	Known RBP	12.73	□□□□□ -0.37
SMG1-213	ENST00000567737	ANAPC5	Q9UJX4	755 aa		12.73	□□□□□ -0.37
SMG1-213	ENST00000567737	SLC22A7	Q9Y694	548 aa		12.73	□□□□□ -0.37
SMG1-213	ENST00000567737	hCG_1818297	A0A087WSY0	165 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	TCRBV16S1A1N1	A0A5B0	115 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	MYO1C	O00159	1063 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	OR2J2	O76002	312 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	ZFAND5	O76080	213 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	MYO1D	O94832	1006 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	MATN4	O95460	622 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	MAOA	P21397	527 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	CTSS	P25774	331 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	SLC1A1	P43005	524 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	DNASE1L1	P49184	302 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	SKP1	P63208	163 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	BTG2	P78543	158 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	TNK1	Q13470	666 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	HERC3	Q15034	1050 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	ZNF750	Q32MQ0	723 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	AARS2	Q5JTZ9	985 aa	Known RBP	12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	CCDC181	Q5TID7	509 aa		12.72	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms