RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 THAP4Q8WY91 577 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 WBP1Q96G27 269 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 CDK15Q96Q40 435 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 ZNF382Q96SR6 550 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 GSTO2Q9H4Y5 243 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 ACTR8Q9H981 624 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 ANKHQ9HCJ1 492 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 SEMA4BQ9NPR2 832 aaPredicted RBP11.74□□□□□ -0.53
RNF40-211ENST00000567365 DMRT3Q9NQL9 472 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 PRDM7Q9NQW5 492 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 ACSS2Q9NR19 701 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 LANCL2Q9NS86 450 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 OXSMQ9NWU1 459 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 PSD3Q9NYI0 1048 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 SENP1Q9P0U3 644 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 TRPC4Q9UBN4 977 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 GPN3Q9UHW5 284 aaPredicted RBP11.74□□□□□ -0.53
RNF40-211ENST00000567365 POLHQ9Y253 713 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 ANGPTL3Q9Y5C1 460 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 PCDHGA11Q9Y5H2 935 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 HS3ST3B1Q9Y662 390 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 KCNMB2Q9Y691 235 aa11.74□□□□□ -0.53
RNF40-211ENST00000567365 CDC14CA4D256 554 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 URADA6NGE7 173 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 ZNF860A6NHJ4 632 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 EIF4E1BA6NMX2 242 aaKnown RBP11.73□□□□□ -0.53
RNF40-211ENST00000567365 ERVH48-1M5A8F1 160 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 ERLIN1O75477 346 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 JRKO75564 520 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 SPTA1P02549 2419 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 H2AFXP16104 143 aaPredicted RBP11.73□□□□□ -0.53
RNF40-211ENST00000567365 TSPAN8P19075 237 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 FOLR3P41439 243 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 ETV4P43268 484 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 CCNG1P51959 295 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 RAB8AP61006 207 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 STXBP1P61764 594 aaKnown RBP11.73□□□□□ -0.53
RNF40-211ENST00000567365 KLC1Q07866 573 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 PCLAFQ15004 111 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 ZRSR2Q15696 482 aaKnown RBP11.73□□□□□ -0.53
RNF40-211ENST00000567365 HIST2H2ACQ16777 129 aaPredicted RBP11.73□□□□□ -0.53
RNF40-211ENST00000567365 TOR1AIP1Q5JTV8 583 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 DEPDC1Q5TB30 811 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 FAM219BQ5XKK7 198 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 HIST2H2AA3Q6FI13 130 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 NIPAL1Q6NVV3 410 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 MRGPREQ86SM8 312 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 EXOC3L1Q86VI1 746 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 MYRIPQ8NFW9 859 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 OR4F6Q8NGB9 312 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 OR5T3Q8NGG3 340 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 OR51Q1Q8NH59 317 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 EXTL1Q92935 676 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 MIEF2Q96C03 454 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 CCDC126Q96EE4 140 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 PGM2Q96G03 612 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 F2RL3Q96RI0 385 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 UBL7Q96S82 380 aaPredicted RBP11.73□□□□□ -0.53
RNF40-211ENST00000567365 MESP1Q9BRJ9 268 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 ZNF717Q9BY31 904 aaPredicted RBP11.73□□□□□ -0.53
RNF40-211ENST00000567365 REXO4Q9GZR2 422 aaKnown RBP11.73□□□□□ -0.53
RNF40-211ENST00000567365 SOX17Q9H6I2 414 aaPredicted RBP11.73□□□□□ -0.53
RNF40-211ENST00000567365 SEMA3GQ9NS98 782 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 C14orf105Q9NVL8 296 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 ADGRE2Q9UHX3 823 aa11.73□□□□□ -0.53
RNF40-211ENST00000567365 LOC102723996A0A087X1L8 192 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 FOXE1O00358 373 aaPredicted RBP11.72□□□□□ -0.53
RNF40-211ENST00000567365 SOCS6O14544 535 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 UBFD1O14562 309 aaKnown RBP11.72□□□□□ -0.53
RNF40-211ENST00000567365 ERI3O43414 337 aaKnown RBP11.72□□□□□ -0.53
RNF40-211ENST00000567365 CHST10O43529 356 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 SUPT7LO94864 414 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 ETHE1O95571 254 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 OTCP00480 354 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 CYC1P08574 325 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 MYL2P10916 166 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 CPA3P15088 417 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 ARFIP1P53367 373 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 OCA2Q04671 838 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 ATP1A4Q13733 1029 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 RUNX2Q13950 521 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 CPSF6Q16630 551 aaKnown RBP eCLIP11.72□□□□□ -0.53
RNF40-211ENST00000567365 DEFB109BQ30KR1 87 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 CEP85LQ5SZL2 805 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 C10orf62Q5T681 223 aaPredicted RBP11.72□□□□□ -0.53
RNF40-211ENST00000567365 FRG2Q64ET8 278 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 BORAQ6PGQ7 559 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 TMEM205Q6UW68 189 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 KIRREL2Q6UWL6 708 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 ZNF793Q6ZN11 406 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 SHISA6Q6ZSJ9 500 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 CROCCP2Q86T23 111 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 RAB43Q86YS6 212 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 EXD3Q8N9H8 876 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 LSM14AQ8ND56 463 aaKnown RBP11.72□□□□□ -0.53
RNF40-211ENST00000567365 ARMC2Q8NEN0 867 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 OR6Y1Q8NGX8 325 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 TRPC4APQ8TEL6 797 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 SLC39A7Q92504 469 aa11.72□□□□□ -0.53
RNF40-211ENST00000567365 CMTM7Q96FZ5 175 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms