RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 CDCP1Q9H5V8 836 aa9.07□□□□□ -0.96
CAPN3-216ENST00000567071 XAB2Q9HCS7 855 aaKnown RBP9.07□□□□□ -0.96
CAPN3-216ENST00000567071 MMP25Q9NPA2 562 aa9.07□□□□□ -0.96
CAPN3-216ENST00000567071 SAYSD1Q9NPB0 183 aa9.07□□□□□ -0.96
CAPN3-216ENST00000567071 ENAMQ9NRM1 1142 aa9.07□□□□□ -0.96
CAPN3-216ENST00000567071 ALKBH4Q9NXW9 302 aa9.07□□□□□ -0.96
CAPN3-216ENST00000567071 ZC3H7BQ9UGR2 993 aaKnown RBP9.07□□□□□ -0.96
CAPN3-216ENST00000567071 ASF1AQ9Y294 204 aa9.07□□□□□ -0.96
CAPN3-216ENST00000567071 KLHL20Q9Y2M5 609 aa9.07□□□□□ -0.96
CAPN3-216ENST00000567071 SVEP1Q4LDE5 3571 aa9.07□□□□□ -0.96
CAPN3-216ENST00000567071 IGHV3-20A0A0C4DH32 117 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 A0A1W2PPR1 153 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 SMAPO00193 183 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 NDST3O95803 873 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 EIF2S1P05198 315 aaKnown RBP9.06□□□□□ -0.96
CAPN3-216ENST00000567071 TUBBP07437 444 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 CYC1P08574 325 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 MGAT1P26572 445 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 CFPP27918 469 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 SOX18P35713 384 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 HMGCLP35914 325 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 SARNPP82979 210 aaKnown RBP9.06□□□□□ -0.96
CAPN3-216ENST00000567071 CDK16Q00536 496 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 DHX9Q08211 1270 aaKnown RBP9.06□□□□□ -0.96
CAPN3-216ENST00000567071 RPA4Q13156 261 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 VEZF1Q14119 521 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 FASTKD3Q14CZ7 662 aaKnown RBP9.06□□□□□ -0.96
CAPN3-216ENST00000567071 BRD3Q15059 726 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 SLC14A2Q15849 920 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 UBAP2Q5T6F2 1119 aaKnown RBP9.06□□□□□ -0.96
CAPN3-216ENST00000567071 RTL6Q6ICC9 239 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 LRRC8BQ6P9F7 803 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 CENPUQ71F23 418 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 LINC00523Q86TU6 105 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 RPS19BP1Q86WX3 136 aaKnown RBP9.06□□□□□ -0.96
CAPN3-216ENST00000567071 ZBED8Q8IZ13 594 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 PDIK1LQ8N165 341 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 AGGF1Q8N302 714 aaeCLIP9.06□□□□□ -0.96
CAPN3-216ENST00000567071 MPP5Q8N3R9 675 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 ZFP62Q8NB50 900 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-216ENST00000567071 ZDHHC16Q969W1 377 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 ISL2Q96A47 359 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 MMABQ96EY8 250 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-216ENST00000567071 ZBED6CLQ96FA7 236 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-216ENST00000567071 CFAP36Q96G28 342 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 ZNF285Q96NJ3 590 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 TRIB3Q96RU7 358 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 NPAS2Q99743 824 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 ADAM19Q9H013 955 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 TRABDQ9H4I3 376 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 COG4Q9H9E3 785 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 SMOXQ9NWM0 555 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 SYBUQ9NX95 663 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 CHMP2BQ9UQN3 213 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 PKP3Q9Y446 797 aa9.06□□□□□ -0.96
CAPN3-216ENST00000567071 CCDC151A5D8V7 595 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 CFAP99D6REC4 459 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 FCHO1O14526 889 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 FFAR3O14843 346 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 GPR42O15529 346 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 GPR39O43194 453 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 MAN1A2O60476 641 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 ERLIN1O75477 346 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 H2AFXP16104 143 aaPredicted RBP9.05□□□□□ -0.96
CAPN3-216ENST00000567071 MAGEA3P43357 314 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 MAGEA4P43358 317 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 PRLHRP49683 370 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 AGTR2P50052 363 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 HLCSP50747 726 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 PPIAP62937 165 aaKnown RBP9.05□□□□□ -0.96
CAPN3-216ENST00000567071 ACTN3Q08043 901 aaPredicted RBP9.05□□□□□ -0.96
CAPN3-216ENST00000567071 CDH17Q12864 832 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 POU6F1Q14863 301 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 SLC1A5Q15758 541 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 DNAJC21Q5F1R6 531 aaKnown RBP9.05□□□□□ -0.96
CAPN3-216ENST00000567071 DENND5AQ6IQ26 1287 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 CASC4Q6P4E1 433 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 EMBQ6PCB8 327 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 RANBP10Q6VN20 620 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 RGS9BPQ6ZS82 235 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 SLC22A16Q86VW1 577 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 TBC1D21Q8IYX1 336 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 EIF1ADQ8N9N8 165 aaKnown RBP9.05□□□□□ -0.96
CAPN3-216ENST00000567071 OR5AR1Q8NGP9 310 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 SARAFQ96BY9 339 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 WDR83Q9BRX9 315 aaKnown RBP9.05□□□□□ -0.96
CAPN3-216ENST00000567071 CDC42EP4Q9H3Q1 356 aaKnown RBP9.05□□□□□ -0.96
CAPN3-216ENST00000567071 CXorf56Q9H5V9 222 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 ARGLU1Q9NWB6 273 aaPredicted RBP9.05□□□□□ -0.96
CAPN3-216ENST00000567071 ZNF629Q9UEG4 869 aaPredicted RBP9.05□□□□□ -0.96
CAPN3-216ENST00000567071 VPS9D1Q9Y2B5 631 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 MAD1L1Q9Y6D9 718 aa9.05□□□□□ -0.96
CAPN3-216ENST00000567071 TENM1Q9UKZ4 2725 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 CR1P17927 2039 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 LOC285095A0A1B0GVY8 99 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 SH3D21A4FU49 640 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 EEF1E1-BLOC1S5C9J1V9 151 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 E7ESA3 106 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 AURKAO14965 403 aa9.04□□□□□ -0.96
CAPN3-216ENST00000567071 EEF1E1O43324 174 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms