RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 PIKFYVEQ9Y2I7 2098 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 CCDC182A6NF36 153 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 H3BM21 787 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 EIF3FO00303 357 aaPredicted RBP15.06■□□□□ 0
COMMD4-215ENST00000566843 SCAMP2O15127 329 aaKnown RBP15.06■□□□□ 0
COMMD4-215ENST00000566843 JUPP14923 745 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 TNFRSF1BP20333 461 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 MRPL58Q14197 206 aaKnown RBP15.06■□□□□ 0
COMMD4-215ENST00000566843 GPR33Q49SQ1 333 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 ARMC12Q5T9G4 340 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 CXorf57Q6NSI4 855 aaKnown RBP15.06■□□□□ 0
COMMD4-215ENST00000566843 XKRXQ6PP77 449 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 LINGO4Q6UY18 593 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 CCDC149Q6ZUS6 474 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 BBS7Q8IWZ6 715 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 ADGRG2Q8IZP9 1017 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 NAGSQ8N159 534 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 OR52J3Q8NH60 311 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 ZFAND1Q8TCF1 268 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 C11orf24Q96F05 449 aaPredicted RBP15.06■□□□□ 0
COMMD4-215ENST00000566843 TTLL2Q9BWV7 592 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 MCOLN1Q9GZU1 580 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 IRF2BPLQ9H1B7 796 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 CWH43Q9H720 699 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 ZFYVE1Q9HBF4 777 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 TIGARQ9NQ88 270 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 CRLS1Q9UJA2 301 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 DNMT3LQ9UJW3 386 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 RUVBL1Q9Y265 456 aaKnown RBP15.06■□□□□ 0
COMMD4-215ENST00000566843 HCN4Q9Y3Q4 1203 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 SCN10AQ9Y5Y9 1956 aa15.06■□□□□ 0
COMMD4-215ENST00000566843 A0A1B0GVM2 712 aa15.05■□□□□ 0
COMMD4-215ENST00000566843 MYADML2A6NDP7 307 aa15.05■□□□□ 0
COMMD4-215ENST00000566843 TFECO14948 347 aaPredicted RBP15.05■□□□□ 0
COMMD4-215ENST00000566843 CRYZL1O95825 349 aa15.05■□□□□ 0
COMMD4-215ENST00000566843 MYL9P24844 172 aa15.05■□□□□ 0
COMMD4-215ENST00000566843 CSTF2P33240 577 aaKnown RBP eCLIP15.05■□□□□ 0
COMMD4-215ENST00000566843 HNMTP50135 292 aa15.05■□□□□ 0
COMMD4-215ENST00000566843 ZXDBP98169 803 aa15.05■□□□□ 0
COMMD4-215ENST00000566843 GAB1Q13480 694 aa15.05■□□□□ 0
COMMD4-215ENST00000566843 LARS2Q15031 903 aaKnown RBP15.05■□□□□ 0
COMMD4-215ENST00000566843 CHRNA6Q15825 494 aa15.05■□□□□ 0
COMMD4-215ENST00000566843 CDKN3Q16667 212 aa15.05■□□□□ 0
COMMD4-215ENST00000566843 PTCHD3Q3KNS1 767 aa15.05■□□□□ 0
COMMD4-215ENST00000566843 CTXN3Q4LDR2 81 aa15.05■□□□□ 0
COMMD4-215ENST00000566843 SLC35F1Q5T1Q4 408 aa15.05■□□□□ 0
COMMD4-215ENST00000566843 MFSD14CQ5VZR4 134 aa15.05■□□□□ 0
COMMD4-215ENST00000566843 KIAA1841Q6NSI8 718 aa15.05■□□□□ 0
COMMD4-215ENST00000566843 RFPL4BQ6ZWI9 263 aa15.05■□□□□ 0
COMMD4-215ENST00000566843 UBE2R2Q712K3 238 aaPredicted RBP15.05■□□□□ 0
COMMD4-215ENST00000566843 TRIM69Q86WT6 500 aa15.05■□□□□ 0
COMMD4-215ENST00000566843 NXPE1Q8N323 547 aa15.05■□□□□ 0
COMMD4-215ENST00000566843 C1orf52Q8N6N3 182 aaKnown RBP15.05■□□□□ 0
COMMD4-215ENST00000566843 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.05■□□□□ 0
COMMD4-215ENST00000566843 C11orf54Q9H0W9 315 aaPredicted RBP15.05■□□□□ 0
COMMD4-215ENST00000566843 CRISPLD1Q9H336 500 aa15.05■□□□□ 0
COMMD4-215ENST00000566843 EXOSC4Q9NPD3 245 aaKnown RBP15.05■□□□□ 0
COMMD4-215ENST00000566843 ACER3Q9NUN7 267 aa15.05■□□□□ 0
COMMD4-215ENST00000566843 WDR70Q9NW82 654 aa15.05■□□□□ 0
COMMD4-215ENST00000566843 STUB1Q9UNE7 303 aa15.05■□□□□ 0
COMMD4-215ENST00000566843 A0A0B4J293 547 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 A0A0G2JMP0 313 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 GLYATL1P3A0A0U1RQE8 302 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 ARRDC5A6NEK1 342 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 SYN3O14994 580 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 PCDH7O60245 1069 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 LGI1O95970 557 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 MYCP01106 439 aaPredicted RBP15.05■□□□□ -0
COMMD4-215ENST00000566843 CYBAP13498 195 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 BPIP17213 487 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 AZGP1P25311 298 aaKnown RBP15.05■□□□□ -0
COMMD4-215ENST00000566843 ERP29P30040 261 aaKnown RBP15.05■□□□□ -0
COMMD4-215ENST00000566843 MVDP53602 400 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 ANXA8L1Q5VT79 327 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 MEDAGQ5VYS4 303 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 PTCHD4Q6ZW05 846 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 DENND1CQ8IV53 801 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 PEX5LQ8IYB4 626 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 RNF175Q8N4F7 328 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 GDPD1Q8N9F7 314 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 VANGL1Q8TAA9 524 aaPredicted RBP15.05■□□□□ -0
COMMD4-215ENST00000566843 RNF31Q96EP0 1072 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 TRMT61AQ96FX7 289 aaKnown RBP15.05■□□□□ -0
COMMD4-215ENST00000566843 METTL2AQ96IZ6 378 aaKnown RBP15.05■□□□□ -0
COMMD4-215ENST00000566843 MSLNLQ96KJ4 702 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 FAM129BQ96TA1 746 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 BBS2Q9BXC9 721 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 CFHR5Q9BXR6 569 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 RNF121Q9H920 327 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 DNAJC11Q9NVH1 559 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 OGDHLQ9ULD0 1010 aa15.05■□□□□ -0
COMMD4-215ENST00000566843 VWA8A3KMH1 1905 aa15.04■□□□□ -0
COMMD4-215ENST00000566843 HYKKA2RU49 373 aa15.04■□□□□ -0
COMMD4-215ENST00000566843 OR6C75A6NL08 312 aa15.04■□□□□ -0
COMMD4-215ENST00000566843 GABRR3A8MPY1 467 aa15.04■□□□□ -0
COMMD4-215ENST00000566843 AGAP14A8MT82 685 aa15.04■□□□□ -0
COMMD4-215ENST00000566843 UPK3BL1B0FP48 263 aa15.04■□□□□ -0
COMMD4-215ENST00000566843 UPK3BL2E5RIL1 263 aa15.04■□□□□ -0
COMMD4-215ENST00000566843 PCDH17O14917 1159 aa15.04■□□□□ -0
COMMD4-215ENST00000566843 TNFRSF21O75509 655 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms