RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 MUC21Q5SSG8 566 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 SMIM5Q71RC9 77 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 Q8N9L7 120 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 OR4C15Q8NGM1 316 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 OR6T1Q8NGN1 323 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 LPGAT1Q92604 370 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 TSACCQ96A04 125 aaPredicted RBP1.45□□□□□ -2.18
SMG1-212ENST00000566328 NABP1Q96AH0 204 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 PAFAH2Q99487 392 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 SCRT1Q9BWW7 348 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 MAK16Q9BXY0 300 aaKnown RBP1.45□□□□□ -2.18
SMG1-212ENST00000566328 SDCBP2Q9H190 292 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 MYNNQ9NPC7 610 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 EIF2B3Q9NR50 452 aaKnown RBP1.45□□□□□ -2.18
SMG1-212ENST00000566328 GSN-AS1Q9NRJ2 163 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 CYTL1Q9NRR1 136 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 PKD2L2Q9NZM6 624 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 DHRS4-AS1Q9P1J3 65 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 FBXL4Q9UKA2 621 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 SPATA2Q9UM82 520 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 ZFYVE9O95405 1425 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 FAM135BQ49AJ0 1406 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 SYNMO15061 1565 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 UBR1Q8IWV7 1749 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 MSH6P52701 1360 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 RAB3GAP2Q9H2M9 1393 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 PLEKHG1Q9ULL1 1385 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 E9PCH4 1651 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 IQGAP1P46940 1657 aa1.45□□□□□ -2.18
SMG1-212ENST00000566328 RGPD8O14715 1765 aaPredicted RBP1.44□□□□□ -2.18
SMG1-212ENST00000566328 LRP6O75581 1613 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 MED14O60244 1454 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 NLRP1Q9C000 1473 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 ARHGAP23Q9P227 1491 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 ARHGEF5Q12774 1597 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 SPATA31D1Q6ZQQ2 1576 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 REREQ9P2R6 1566 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 ARHGAP31Q2M1Z3 1444 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 ERBINQ96RT1 1412 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 SETD5Q9C0A6 1442 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 ADGRL3Q9HAR2 1447 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 A0A1W2PPQ1 181 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 BCLAF3A2AJT9 711 aaKnown RBP1.44□□□□□ -2.18
SMG1-212ENST00000566328 MTMR11A4FU01 709 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 CASTOR2A6NHX0 329 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 TCP10L2B9ZVM9 353 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 ZNF253O75346 499 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 TOMM70O94826 608 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 SEMA4FO95754 770 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 CD4P01730 458 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 RAB40ALP0C0E4 278 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 SAGP10523 405 aaPredicted RBP1.44□□□□□ -2.18
SMG1-212ENST00000566328 CD1DP15813 335 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 PFKFB1P16118 471 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 TRIM21P19474 475 aaKnown RBP1.44□□□□□ -2.18
SMG1-212ENST00000566328 MDKP21741 143 aaPredicted RBP1.44□□□□□ -2.18
SMG1-212ENST00000566328 FASP25445 335 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 CD27P26842 260 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 RPL9P32969 192 aaKnown RBP1.44□□□□□ -2.18
SMG1-212ENST00000566328 MAN1A1P33908 653 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 PSMB10P40306 273 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 BRCC3P46736 316 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 CDH13P55290 713 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 CKAP4Q07065 602 aaKnown RBP1.44□□□□□ -2.18
SMG1-212ENST00000566328 TEFQ10587 303 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 IRF3Q14653 427 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 KNOP1Q1ED39 458 aaKnown RBP1.44□□□□□ -2.18
SMG1-212ENST00000566328 GSG1Q2KHT4 349 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 ISXQ2M1V0 245 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 TMEM95Q3KNT9 176 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 XKR4Q5GH76 650 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 RAB41Q5JT25 222 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 HAUS3Q68CZ6 603 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 OR4C11Q6IEV9 310 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 CYB5D1Q6P9G0 228 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 ZNF600Q6ZNG1 722 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 MCM10Q7L590 875 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 UNC5CLQ8IV45 518 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 CARNMT1Q8N4J0 409 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 TTC39CQ8N584 583 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 RASGEF1AQ8N9B8 481 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 NAXEQ8NCW5 288 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 IL17REQ8NFR9 667 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 OR2L5Q8NG80 312 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 KIR2DL5BQ8NHK3 375 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 UCMAQ8WVF2 138 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 MOB3AQ96BX8 217 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 RUNDC3BQ96NL0 473 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 POLR3GLQ9BT43 218 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 PAPOLGQ9BWT3 736 aaKnown RBP1.44□□□□□ -2.18
SMG1-212ENST00000566328 UNC45AQ9H3U1 944 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 WDR41Q9HAD4 459 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 CDH20Q9HBT6 801 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 DEPPQ9NTK1 212 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 OLA1Q9NTK5 396 aaKnown RBP1.44□□□□□ -2.18
SMG1-212ENST00000566328 THYN1Q9P016 225 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 SUCLA2Q9P2R7 463 aaPredicted RBP1.44□□□□□ -2.18
SMG1-212ENST00000566328 PGAP2Q9UHJ9 254 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 CPSF3Q9UKF6 684 aaKnown RBP1.44□□□□□ -2.18
SMG1-212ENST00000566328 MGAT4AQ9UM21 535 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms