RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.18■□□□□ 0.18
CDC42BPB-208ENST00000561271 KCNK13Q9HB14 408 aa16.18■□□□□ 0.18
CDC42BPB-208ENST00000561271 DNAJC11Q9NVH1 559 aa16.18■□□□□ 0.18
CDC42BPB-208ENST00000561271 CD274Q9NZQ7 290 aa16.18■□□□□ 0.18
CDC42BPB-208ENST00000561271 ERRFI1Q9UJM3 462 aaPredicted RBP16.18■□□□□ 0.18
CDC42BPB-208ENST00000561271 CENPEQ02224 2701 aa16.18■□□□□ 0.18
CDC42BPB-208ENST00000561271 CACNA1CQ13936 2221 aa16.18■□□□□ 0.18
CDC42BPB-208ENST00000561271 TRAV17A0A0B4J275 112 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 URADA6NGE7 173 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 A8MUI8 341 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 SERPINA6P08185 405 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 SLC35E2BP0CK96 405 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 JAK1P23458 1154 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 HNRNPH1P31943 449 aaKnown RBP16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 SPRP35270 261 aaPredicted RBP16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 ST13P50502 369 aaKnown RBP16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 GRTP1Q5TC63 336 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 HIST2H2BCQ6DN03 193 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 ADNP2Q6IQ32 1131 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 NIPAL1Q6NVV3 410 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 TMIGD1Q6UXZ0 262 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 BEST3Q8N1M1 668 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 PDPRQ8NCN5 879 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 PLPP5Q8NEB5 264 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 FAR1Q8WVX9 515 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 HAS2Q92819 552 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 UBXN10Q96LJ8 280 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 TAAR6Q96RI8 345 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 LPAR4Q99677 370 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 RNF32Q9H0A6 362 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 RHBGQ9H310 441 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 CNOT10Q9H9A5 744 aaKnown RBP16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 TEKT2Q9UIF3 430 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 RNF112Q9ULX5 631 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 ASB1Q9Y576 335 aa16.17■□□□□ 0.18
CDC42BPB-208ENST00000561271 UNC79Q9P2D8 2635 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 A1L4Q6 167 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 OR5H15A6NDH6 313 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 PRAMEF4O60810 478 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 S100BP04271 92 aaPredicted RBP16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 SMIM10L1P0DMW3 83 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 RNH1P13489 461 aaKnown RBP16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 MAOAP21397 527 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 OR4D2P58180 307 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 BTG2P78543 158 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 ACTN3Q08043 901 aaPredicted RBP16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 DLG1Q12959 904 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 EXT1Q16394 746 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 PDK4Q16654 411 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 PRAMEF9Q5VWM5 478 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 SULT1C3Q6IMI6 304 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 RPUSD3Q6P087 351 aaKnown RBP16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 RAPH1Q70E73 1250 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 CRLF3Q8IUI8 442 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 CA13Q8N1Q1 262 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 GAL3ST3Q96A11 431 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 KIAA1191Q96A73 305 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 SMIM10Q96HG1 83 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 NPAS2Q99743 824 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 SLX1AQ9BQ83 275 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 LRRC1Q9BTT6 524 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 ALG9Q9H6U8 611 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 OLAHQ9NV23 265 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 GPRC5BQ9NZH0 403 aa16.16■□□□□ 0.18
CDC42BPB-208ENST00000561271 DNAJC13O75165 2243 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 FAM227AF5H4B4 570 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 PSMD12O00232 456 aaPredicted RBP16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 CLGNO14967 610 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 ERI3O43414 337 aaKnown RBP16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 MAN1A2O60476 641 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 H2AFYO75367 372 aaKnown RBP16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 STK16O75716 305 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 URI1O94763 535 aaPredicted RBP16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 EDN3P14138 238 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 TFEBP19484 476 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 GGT5P36269 586 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 SLC26A5P58743 744 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 STXBP1P61764 594 aaKnown RBP16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 GUCY2DQ02846 1103 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 SRSF11Q05519 484 aaKnown RBP16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 NAB1Q13506 487 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 BMPR2Q13873 1038 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 INAQ16352 499 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 ACER2Q5QJU3 275 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 UBAP2Q5T6F2 1119 aaKnown RBP16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 QSOX2Q6ZRP7 698 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 VN1R5Q7Z5H4 357 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 CYP4X1Q8N118 509 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 KRT78Q8N1N4 520 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 BCORP1Q8N888 145 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 MRRFQ96E11 262 aaKnown RBP16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 PTCHD1Q96NR3 888 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 MMP25Q9NPA2 562 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 ZDHHC18Q9NUE0 388 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 STMN3Q9NZ72 180 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 PLEKHB1Q9UF11 243 aaPredicted RBP16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 NCOA6Q14686 2063 aaPredicted RBP16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 EXPH5Q8NEV8 1989 aa16.15■□□□□ 0.18
CDC42BPB-208ENST00000561271 ZNF407Q9C0G0 2248 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 SUPT3HB4E1H0 165 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms