RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 KLC1Q07866 573 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 HIST2H2ACQ16777 129 aaPredicted RBP14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 KRT71Q3SY84 523 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 GGTA1PQ4G0N0 100 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 DEFB134Q4QY38 66 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 UNC50Q53HI1 259 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 HIST2H2AA3Q6FI13 130 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 NIPAL1Q6NVV3 410 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 ZYG11AQ6WRX3 759 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 ATG14Q6ZNE5 492 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 SHISA6Q6ZSJ9 500 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 PRICKLE2Q7Z3G6 844 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 SLC22A9Q8IVM8 553 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 BANPQ8N9N5 519 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 OR5T3Q8NGG3 340 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 C9orf43Q8TAL5 461 aaPredicted RBP14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 WDR20Q8TBZ3 569 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 MIEF2Q96C03 454 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 MS4A6EQ96DS6 147 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 L3HYPDHQ96EM0 354 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 CDK15Q96Q40 435 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 C12orf65Q9H3J6 166 aaKnown RBP14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 HCN3Q9P1Z3 774 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 GRID1Q9ULK0 1009 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 MAN2B2Q9Y2E5 1009 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 RNF11Q9Y3C5 154 aa14.66□□□□□ -0.06
RABGGTA-219ENST00000560871 PPP6CO00743 305 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 SOCS6O14544 535 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 DNAJB6O75190 326 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 BMP10O95393 424 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 CLDN9O95484 217 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 MMP11P24347 488 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 SERPINB1P30740 379 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 CCNG1P51959 295 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 PRKAA2P54646 552 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 CDH13P55290 713 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 SKP1P63208 163 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 ATP1A4Q13733 1029 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 BEND6Q5SZJ8 279 aaPredicted RBP14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 CPZQ66K79 652 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 PTRH1Q86Y79 214 aaKnown RBP14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 APLFQ8IW19 511 aaPredicted RBP14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 SRRM1Q8IYB3 904 aaKnown RBP14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 RNF175Q8N4F7 328 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 OR2L5Q8NG80 312 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 OR51Q1Q8NH59 317 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 RDH11Q8TC12 318 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 CCT6BQ92526 530 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 NACC2Q96BF6 587 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 CRB3Q9BUF7 120 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 REXO4Q9GZR2 422 aaKnown RBP14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 SEMA4BQ9NPR2 832 aaPredicted RBP14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 DMRT3Q9NQL9 472 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 ACSS2Q9NR19 701 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 ZNF225Q9UK10 706 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 HS3ST3B1Q9Y662 390 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 BOD1L1Q8NFC6 3051 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 CCDC88CQ9P219 2028 aa14.65□□□□□ -0.06
RABGGTA-219ENST00000560871 IDSB3KWA1 339 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 ERI3O43414 337 aaKnown RBP14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 ERLIN1O75477 346 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 JRKO75564 520 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 SUPT7LO94864 414 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 PCNAP12004 261 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 CREB1P16220 341 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 TSPAN8P19075 237 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 IMPDH1P20839 514 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 PIK3CBP42338 1070 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 XCR1P46094 333 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 OLR1P78380 273 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 CLCQ05315 142 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 TNFAIP8L3Q5GJ75 292 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 LETMD1Q6P1Q0 360 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 ABHD17CQ6PCB6 329 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 LAPTM4BQ86VI4 370 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 MYLK4Q86YV6 388 aaPredicted RBP14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 PRSS58Q8IYP2 241 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 OR4F6Q8NGB9 312 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 HUS1BQ8NHY5 278 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 QRFPRQ96P65 431 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 IP6K3Q96PC2 410 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 MESP1Q9BRJ9 268 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 TRIM55Q9BYV6 548 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 GSTO2Q9H4Y5 243 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 ZNF71Q9NQZ8 489 aaPredicted RBP14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 SEMA3GQ9NS98 782 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 C3orf18Q9UK00 162 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 PLLPQ9Y342 182 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 PCDHGA11Q9Y5H2 935 aa14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 HELZ2Q9BYK8 2649 aaKnown RBP14.64□□□□□ -0.07
RABGGTA-219ENST00000560871 NUP210LQ5VU65 1888 aa14.63□□□□□ -0.07
RABGGTA-219ENST00000560871 SPENQ96T58 3664 aaKnown RBP14.63□□□□□ -0.07
RABGGTA-219ENST00000560871 A0A0G2JN53 185 aa14.63□□□□□ -0.07
RABGGTA-219ENST00000560871 A0A1W2PQ72 361 aa14.63□□□□□ -0.07
RABGGTA-219ENST00000560871 ARGFXA6NJG6 315 aa14.63□□□□□ -0.07
RABGGTA-219ENST00000560871 PYCARD-AS1I3L0S3 204 aa14.63□□□□□ -0.07
RABGGTA-219ENST00000560871 CTIFO43310 598 aaKnown RBP14.63□□□□□ -0.07
RABGGTA-219ENST00000560871 ZIC2O95409 532 aaPredicted RBP14.63□□□□□ -0.07
RABGGTA-219ENST00000560871 OTCP00480 354 aa14.63□□□□□ -0.07
RABGGTA-219ENST00000560871 IGHEP01854 428 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms