RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 RAD9BQ6WBX8 426 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 MBOAT1Q6ZNC8 495 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 LIAT1Q6ZQX7 453 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 ACAD11Q709F0 780 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 SLC13A5Q86YT5 568 aaPredicted RBP9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 TGIF2LYQ8IUE0 185 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 CILP2Q8IUL8 1156 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 GIMAP7Q8NHV1 300 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 ELP5Q8TE02 316 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 SREK1Q8WXA9 508 aaKnown RBP9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 ASB11Q8WXH4 323 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 ZNF669Q96BR6 464 aaPredicted RBP9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 GPR21Q99679 349 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 TREX2Q9BQ50 279 aaPredicted RBP9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 CCDC77Q9BR77 488 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 KIFC1Q9BW19 673 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 POLDIP3Q9BY77 421 aaKnown RBP9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 TIMMDC1Q9NPL8 285 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 SOX13Q9UN79 622 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 SH2B3Q9UQQ2 575 aa9.81□□□□□ -0.84
CDC42BPB-207ENST00000560492 PRRC2AP48634 2157 aaKnown RBP9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 MYO1DO94832 1006 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 TUBB4AP04350 444 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 HOXD4P09016 255 aaPredicted RBP9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 ZNF888P0CJ79 500 aaPredicted RBP9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 ALOX12P18054 663 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 DNASE1P24855 282 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 VPS41P49754 854 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 DGKQP52824 942 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 ADARP55265 1226 aaKnown RBP9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 PPIAP62937 165 aaKnown RBP9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 BTG2P78543 158 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 MPP1Q00013 466 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 CTBP1Q13363 440 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 DHX34Q14147 1143 aaKnown RBP9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 RPS6KA1Q15418 735 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 AGTRAPQ6RW13 159 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 C4orf22Q6V702 233 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 CENPUQ71F23 418 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 ABHD13Q7L211 337 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 PCGF5Q86SE9 256 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 ZNF227Q86WZ6 799 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 DENND6AQ8IWF6 608 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 LRRC56Q8IYG6 542 aaPredicted RBP9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 ZZZ3Q8IYH5 903 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 MFSD9Q8NBP5 474 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 ACBD4Q8NC06 268 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 ZNF740Q8NDX6 193 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 MYRIPQ8NFW9 859 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 OR52N2Q8NGI0 321 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 RMND5BQ96G75 393 aaPredicted RBP9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 HES6Q96HZ4 224 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 DESI2Q9BSY9 194 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 FAM129AQ9BZQ8 928 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 EXO5Q9H790 373 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 PNO1Q9NRX1 252 aaKnown RBP9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 ALKBH4Q9NXW9 302 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 KCMF1Q9P0J7 381 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 TRMT6Q9UJA5 497 aaKnown RBP9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 HRH3Q9Y5N1 445 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 SLC22A7Q9Y694 548 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 CAPN6Q9Y6Q1 641 aa9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 NIPBLQ6KC79 2804 aaeCLIP9.8□□□□□ -0.84
CDC42BPB-207ENST00000560492 FIGNL2A6NMB9 653 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 A8MVJ9 347 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 G3V3Y1 287 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 GFYI3L273 518 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 CDK2AP1O14519 115 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 GALR3O60755 368 aaPredicted RBP9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 AVILO75366 819 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 ITGA10O75578 1167 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 HIST1H2AGP0C0S8 130 aaPredicted RBP9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 RNH1P13489 461 aaKnown RBP9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 HOXB4P17483 251 aaPredicted RBP9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 IGFBP2P18065 325 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 HIST1H2ADP20671 130 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 CCND1P24385 295 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 TRHRP34981 398 aaPredicted RBP9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 SKIV2L2P42285 1042 aaKnown RBP9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 RGS4P49798 205 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 SSR4P51571 173 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 CCR8P51685 355 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 CLCN2P51788 898 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 ZNF75DP51815 510 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 RAB8AP61006 207 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 TFF3Q07654 80 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 SNTB1Q13884 538 aaKnown RBP9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 TRIP13Q15645 432 aaPredicted RBP9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 KCTD19Q17RG1 926 aaPredicted RBP9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 HECTD2Q5U5R9 776 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 NIPAL1Q6NVV3 410 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 QSOX2Q6ZRP7 698 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 MDGA2Q7Z553 956 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 WDR53Q7Z5U6 358 aaPredicted RBP9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 MYO1HQ8N1T3 1032 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 GOT1L1Q8NHS2 421 aaPredicted RBP9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 KCNJ9Q92806 393 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 TRIM44Q96DX7 344 aaPredicted RBP9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 TM4SF19Q96DZ7 209 aa9.79□□□□□ -0.84
CDC42BPB-207ENST00000560492 HIST1H2AHQ96KK5 128 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms