RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 KLHL33A6NCF5 533 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 E7ENX8 843 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 TEX46H3BTG2 121 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 SOX1O00570 391 aaPredicted RBP13.01□□□□□ -0.33
TRAF3-208ENST00000560371 MTHFD1P11586 935 aaKnown RBP13.01□□□□□ -0.33
TRAF3-208ENST00000560371 DRD1P21728 446 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 UFM1P61960 85 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 SLAMF1Q13291 335 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 PQLC3Q8N755 202 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 THAP3Q8WTV1 239 aaPredicted RBP13.01□□□□□ -0.33
TRAF3-208ENST00000560371 SLC39A3Q9BRY0 314 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 TPT1P8Q9HAU6 139 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 GRIP1Q9Y3R0 1128 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 ETS2P15036 469 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 EEFSECP57772 596 aaKnown RBP13.01□□□□□ -0.33
TRAF3-208ENST00000560371 OR12D2P58182 307 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 ABATP80404 500 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 EMC10Q5UCC4 262 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 OR2T5Q6IEZ7 315 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 OR2T29Q8NH02 315 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 SETD1AO15047 1707 aaKnown RBP13.01□□□□□ -0.33
TRAF3-208ENST00000560371 AGPSO00116 658 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 APBB3O95704 486 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 JUPP14923 745 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 FBLP22087 321 aaKnown RBP13□□□□□ -0.33
TRAF3-208ENST00000560371 PEX2P28328 305 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 OR4K1Q8NGD4 311 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 CAPSLQ8WWF8 208 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 SLC17A9Q9BYT1 436 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 FZD3Q9NPG1 666 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 TIGARQ9NQ88 270 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 CD207Q9UJ71 328 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 A6NCN8 305 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 SAGE2PA6NJ88 616 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 ACSBG2Q5FVE4 666 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 FIP1L1Q6UN15 594 aaKnown RBP13□□□□□ -0.33
TRAF3-208ENST00000560371 TPSD1Q9BZJ3 242 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 AHCYL1O43865 530 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 NR4A1P22736 598 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 SUOXP51687 545 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 ANKRD26P1Q6NSI1 321 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 ZNF572Q7Z3I7 529 aaPredicted RBP13□□□□□ -0.33
TRAF3-208ENST00000560371 ASPGQ86U10 573 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 GORASP1Q9BQQ3 440 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 HERC2P3Q9BVR0 1158 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 TMEM59LQ9UK28 342 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 FAM72CH0Y354 149 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 HCRTR2O43614 444 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 CHP2O43745 196 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 ITGA5P08648 1049 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 FOXN2P32314 431 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 RABIFP47224 123 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 FAM72AQ5TYM5 149 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 FAM72DQ6L9T8 149 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 FAM72BQ86X60 149 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 ZNF101Q8IZC7 436 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 KLHL36Q8N4N3 616 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 TMEM40Q8WWA1 233 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13□□□□□ -0.33
TRAF3-208ENST00000560371 NLGN3Q9NZ94 848 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 GLS2Q9UI32 602 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 OR1A2Q9Y585 309 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 C6orf47O95873 294 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 RAB28P51157 221 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 EMX2Q04743 252 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 SWI5Q1ZZU3 235 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 TMPRSS9Q7Z410 1059 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 FCGR1BQ92637 280 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 POFUT2Q9Y2G5 429 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 DDX60Q8IY21 1712 aaKnown RBP13□□□□□ -0.33
TRAF3-208ENST00000560371 C6P13671 934 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 PLP2Q04941 152 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 MSS51Q4VC12 460 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 ZNF648Q5T619 568 aaPredicted RBP13□□□□□ -0.33
TRAF3-208ENST00000560371 ARHGAP22Q7Z5H3 698 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 DNAJA4Q8WW22 397 aaPredicted RBP13□□□□□ -0.33
TRAF3-208ENST00000560371 CPNE2Q96FN4 548 aaPredicted RBP13□□□□□ -0.33
TRAF3-208ENST00000560371 ZFP3Q96NJ6 502 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 OR52B2Q96RD2 323 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 NELL2Q99435 816 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 TNFRSF10DQ9UBN6 386 aa13□□□□□ -0.33
TRAF3-208ENST00000560371 AQP12BA6NM10 295 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 RPP14O95059 124 aaKnown RBP12.99□□□□□ -0.33
TRAF3-208ENST00000560371 AGTR2P50052 363 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 SPANXN4Q5MJ08 99 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 ZNF550Q7Z398 422 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 AQP12AQ8IXF9 295 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 C7orf57Q8NEG2 295 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 AMBNQ9NP70 447 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 B4GALT7Q9UBV7 327 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 MGAT4AQ9UM21 535 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 HERC3Q15034 1050 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 PON3Q15166 354 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 REEP3Q6NUK4 255 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 ANKLE1Q8NAG6 615 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 G6PC3Q9BUM1 346 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 PLCL2Q9UPR0 1127 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 WASF2Q9Y6W5 498 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 COL2A1P02458 1487 aaPredicted RBP12.99□□□□□ -0.33
TRAF3-208ENST00000560371 MEIS3P2A8K0S8 358 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms