RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 SCRG1O75711 98 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 RSL1D1O76021 490 aaKnown RBP14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 NSA2O95478 260 aaKnown RBP14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 TGFB1P01137 390 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 HBQ1P09105 142 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 PCNAP12004 261 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 NEFHP12036 1026 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 ALOX12P18054 663 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 STXBP1P61764 594 aaKnown RBP14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 CYP4F2P78329 520 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 GABREP78334 506 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 BTKQ06187 659 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 FOXC1Q12948 553 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 MUM1Q2TAK8 710 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 MRM1Q6IN84 353 aaKnown RBP14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 CGB2Q6NT52 195 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 ZNF793Q6ZN11 406 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 CHSY3Q70JA7 882 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 DTX1Q86Y01 620 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 GPR135Q8IZ08 494 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 PROKR1Q8TCW9 393 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 FAR2Q96K12 515 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 F2RL3Q96RI0 385 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 TBCDQ9BTW9 1192 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 NLNQ9BYT8 704 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 REXO4Q9GZR2 422 aaKnown RBP14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 OR51B5Q9H339 312 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 MEAF6Q9HAF1 191 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 SLC22A11Q9NSA0 550 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 VPS29Q9UBQ0 182 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 DKK4Q9UBT3 224 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 ZMIZ1Q9ULJ6 1067 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 PTGDR2Q9Y5Y4 395 aa14.06□□□□□ -0.16
SNRPA1-207ENST00000559309 ANKRD11Q6UB99 2663 aaPredicted RBP14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 IGLV3-12A0A075B6K2 115 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 A0A1B0GX78 115 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 URADA6NGE7 173 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 TCP11X1B4DZS4 312 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 H0YIG0 161 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 TERTO14746 1132 aaKnown RBP14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 LSM1O15116 133 aaKnown RBP14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 HDAC3O15379 428 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 CPNE3O75131 537 aaKnown RBP14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 TNFSF15O95150 251 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 STATHP02808 62 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 CD82P27701 267 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 MAPK10P53779 464 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 GYS2P54840 703 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 PHEXP78562 749 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 HERC3Q15034 1050 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 SMU1Q2TAY7 513 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 TOR1AIP1Q5JTV8 583 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 TTC19Q6DKK2 380 aaPredicted RBP14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 NIPAL1Q6NVV3 410 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 PRSS41Q7RTY9 318 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 TIPARPQ7Z3E1 657 aaKnown RBP14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 WDR75Q8IWA0 830 aaKnown RBP14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 DSELQ8IZU8 1212 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 ZCCHC7Q8N3Z6 543 aaKnown RBP14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 DTWD1Q8N5C7 304 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 AMER3Q8N944 861 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 TTC29Q8NA56 475 aaPredicted RBP14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 SRFBP1Q8NEF9 429 aaKnown RBP14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.05□□□□□ -0.167e-11■■■■□ 26.3
SNRPA1-207ENST00000559309 GATA6Q92908 595 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 MTFMTQ96DP5 389 aaKnown RBP14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 KCNC2Q96PR1 638 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 HBEGFQ99075 208 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 DPH2Q9BQC3 489 aaPredicted RBP14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 DDX31Q9H8H2 851 aaKnown RBP14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 ACTR5Q9H9F9 607 aaPredicted RBP14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 VTI1BQ9UEU0 232 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 ADAM29Q9UKF5 820 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 SEC16AO15027 2179 aa14.05□□□□□ -0.16
SNRPA1-207ENST00000559309 TRABD2BA6NFA1 517 aa14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 SRRM3A6NNA2 597 aaPredicted RBP14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 SLC28A1O00337 649 aa14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 SDHDO14521 159 aa14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 EIF2S1P05198 315 aaKnown RBP14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 ZNF888P0CJ79 500 aaPredicted RBP14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 ACPPP15309 386 aa14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 TPP2P29144 1249 aaPredicted RBP14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 SLC5A2P31639 672 aa14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 ARL1P40616 181 aaPredicted RBP14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 RAE1P78406 368 aaKnown RBP14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 HMGCS1Q01581 520 aa14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 DDX39BQ13838 428 aaKnown RBP14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 PRMT9Q6P2P2 845 aa14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 LARP4Q71RC2 724 aaKnown RBP eCLIP14.04□□□□□ -0.165e-6■□□□□ 10.3
SNRPA1-207ENST00000559309 COX15Q7KZN9 410 aa14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 ABHD13Q7L211 337 aa14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 CRLF3Q8IUI8 442 aa14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 TMEM126BQ8IUX1 230 aa14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 N4BP2L2Q92802 583 aaPredicted RBP14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 RGMAQ96B86 450 aa14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 C19orf60Q96EN9 201 aa14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 NDC1Q9BTX1 674 aa14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 NPLQ9BXD5 320 aaPredicted RBP14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 FAM117AQ9C073 453 aa14.04□□□□□ -0.16
SNRPA1-207ENST00000559309 SLC26A1Q9H2B4 701 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms