RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 LAPTM5Q13571 262 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 RUNX2Q13950 521 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 ERV3-1Q14264 604 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 UGT8Q16880 541 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 LINC00303Q3SY05 128 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 CRTC2Q53ET0 693 aaPredicted RBP10.82□□□□□ -0.68
SNX1-204ENST00000559061 TTMPQ5BVD1 217 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 MLIPQ5VWP3 458 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 ABHD17CQ6PCB6 329 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 SLC22A9Q8IVM8 553 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 TMEM52Q8NDY8 209 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 OR2Y1Q8NGV0 311 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 STT3BQ8TCJ2 826 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 GAL3ST3Q96A11 431 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 KIAA1143Q96AT1 154 aaPredicted RBP10.82□□□□□ -0.68
SNX1-204ENST00000559061 MMABQ96EY8 250 aaPredicted RBP10.82□□□□□ -0.68
SNX1-204ENST00000559061 SEC16BQ96JE7 1060 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 PKNOX2Q96KN3 472 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 MTERF1Q99551 399 aaKnown RBP10.82□□□□□ -0.68
SNX1-204ENST00000559061 SH3GL2Q99962 352 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 OR51B5Q9H339 312 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 SOX17Q9H6I2 414 aaPredicted RBP10.82□□□□□ -0.68
SNX1-204ENST00000559061 WDR54Q9H977 334 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 SSU72Q9NP77 194 aaKnown RBP10.82□□□□□ -0.68
SNX1-204ENST00000559061 LANCL2Q9NS86 450 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 WDR70Q9NW82 654 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 ANGPTL3Q9Y5C1 460 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 CLDN16Q9Y5I7 305 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 ZNF891A8MT65 544 aaPredicted RBP10.81□□□□□ -0.68
SNX1-204ENST00000559061 C9J4A7 227 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 TGFBR3LH3BV60 316 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 SAP18O00422 153 aaKnown RBP10.81□□□□□ -0.68
SNX1-204ENST00000559061 PLPP1O14494 284 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 SOCS6O14544 535 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 PRPF4O43172 522 aaKnown RBP eCLIP10.81□□□□□ -0.68
SNX1-204ENST00000559061 ERI3O43414 337 aaKnown RBP10.81□□□□□ -0.68
SNX1-204ENST00000559061 SCELO95171 688 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 BMP10O95393 424 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 TGFB1P01137 390 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 ALBP02768 609 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 CHRNGP07510 517 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 ZGLP1P0C6A0 271 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 PCNAP12004 261 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 CHN1P15882 459 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 CERS1P27544 350 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 GSTM2P28161 218 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 CCNG1P51959 295 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 HNRNPFP52597 415 aaKnown RBP10.81□□□□□ -0.68
SNX1-204ENST00000559061 UCNP55089 124 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 WDR4P57081 412 aaKnown RBP10.81□□□□□ -0.68
SNX1-204ENST00000559061 RPS13P62277 151 aaKnown RBP10.81□□□□□ -0.68
SNX1-204ENST00000559061 KLC1Q07866 573 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 RGS1Q08116 209 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 LCP2Q13094 533 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 PAGE2BQ5JRK9 111 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 BROXQ5VW32 411 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 LIPMQ5VYY2 423 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 CPZQ66K79 652 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 ZCCHC23Q6ZST2 131 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 CA13Q8N1Q1 262 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 TTLQ8NG68 377 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 OR2L5Q8NG80 312 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 COL26A1Q96A83 441 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 SMC6Q96SB8 1091 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 CSF3RQ99062 836 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 HBEGFQ99075 208 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 C17orf62Q9BQA9 187 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 RBCK1Q9BYM8 510 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 TGIF2Q9GZN2 237 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 SENP1Q9P0U3 644 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 TRPS1Q9UHF7 1281 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 KCND3Q9UK17 655 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 RALYQ9UKM9 306 aaKnown RBP10.81□□□□□ -0.68
SNX1-204ENST00000559061 PTRH2Q9Y3E5 179 aaKnown RBP10.81□□□□□ -0.68
SNX1-204ENST00000559061 MAP4K5Q9Y4K4 846 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 ACTL7BQ9Y614 415 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 HS3ST3B1Q9Y662 390 aa10.81□□□□□ -0.68
SNX1-204ENST00000559061 CDC14CA4D256 554 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 FAM227AF5H4B4 570 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 CHST10O43529 356 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 OTCP00480 354 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 PDYNP01213 254 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 BPGMP07738 259 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 PIK3CBP42338 1070 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 SERPINB4P48594 390 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 PLA2G16P53816 162 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 RPS15P62841 145 aaKnown RBP10.8□□□□□ -0.68
SNX1-204ENST00000559061 RHAGQ02094 409 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 ATP1A4Q13733 1029 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 DDX39BQ13838 428 aaKnown RBP10.8□□□□□ -0.68
SNX1-204ENST00000559061 HERC3Q15034 1050 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 RBBP7Q16576 425 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 TBR1Q16650 682 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 NDUFA9Q16795 377 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 DEPDC1Q5TB30 811 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 KHDRBS2Q5VWX1 349 aaKnown RBP10.8□□□□□ -0.68
SNX1-204ENST00000559061 FRG2Q64ET8 278 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 GPRIN3Q6ZVF9 776 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 MILR1Q7Z6M3 343 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 MRGPREQ86SM8 312 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms