RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 CYP4X1Q8N118 509 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 TBC1D19Q8N5T2 526 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 ANKRD53Q8N9V6 530 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 ACBD4Q8NC06 268 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 GABPB2Q8TAK5 448 aaPredicted RBP14.93□□□□□ -0.02
SCFD1-224ENST00000557713 SLC5A11Q8WWX8 675 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 ATL1Q8WXF7 558 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 NEIL2Q969S2 332 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 VKORC1Q9BQB6 163 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 TRIM54Q9BYV2 358 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 SLC6A16Q9GZN6 736 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 PLAC1Q9HBJ0 212 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 PPP2R2CQ9Y2T4 447 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 SAGE2PA6NJ88 616 aa14.92□□□□□ -0.02
SCFD1-224ENST00000557713 BANF1O75531 89 aa14.92□□□□□ -0.02
SCFD1-224ENST00000557713 ENO2P09104 434 aaPredicted RBP14.92□□□□□ -0.02
SCFD1-224ENST00000557713 ZNF24P17028 368 aa14.92□□□□□ -0.02
SCFD1-224ENST00000557713 MAOAP21397 527 aa14.92□□□□□ -0.02
SCFD1-224ENST00000557713 ITGA8P53708 1063 aa14.92□□□□□ -0.02
SCFD1-224ENST00000557713 KRTAP10-9P60411 292 aa14.92□□□□□ -0.02
SCFD1-224ENST00000557713 RAB8AP61006 207 aa14.92□□□□□ -0.02
SCFD1-224ENST00000557713 PDAP1Q13442 181 aaKnown RBP14.92□□□□□ -0.02
SCFD1-224ENST00000557713 TEDDM1Q5T9Z0 273 aa14.92□□□□□ -0.02
SCFD1-224ENST00000557713 TRPV3Q8NET8 790 aa14.92□□□□□ -0.02
SCFD1-224ENST00000557713 GRK7Q8WTQ7 553 aa14.92□□□□□ -0.02
SCFD1-224ENST00000557713 PDLIM5Q96HC4 596 aaKnown RBP14.92□□□□□ -0.02
SCFD1-224ENST00000557713 NAP1L3Q99457 506 aaPredicted RBP14.92□□□□□ -0.02
SCFD1-224ENST00000557713 ENKD1Q9H0I2 346 aa14.92□□□□□ -0.02
SCFD1-224ENST00000557713 KLHL31Q9H511 634 aa14.92□□□□□ -0.02
SCFD1-224ENST00000557713 NECTIN3Q9NQS3 549 aa14.92□□□□□ -0.02
SCFD1-224ENST00000557713 PRDM9Q9NQV7 894 aa14.92□□□□□ -0.02
SCFD1-224ENST00000557713 ZFATQ9P243 1243 aa14.92□□□□□ -0.02
SCFD1-224ENST00000557713 SLC17A6Q9P2U8 582 aa14.92□□□□□ -0.02
SCFD1-224ENST00000557713 IKZF3Q9UKT9 509 aa14.92□□□□□ -0.02
SCFD1-224ENST00000557713 VWA7Q9Y334 891 aa14.92□□□□□ -0.02
SCFD1-224ENST00000557713 ANKRD17O75179 2603 aaKnown RBP14.91□□□□□ -0.02
SCFD1-224ENST00000557713 PGRMC1O00264 195 aaKnown RBP14.91□□□□□ -0.02
SCFD1-224ENST00000557713 PRRG2O14669 202 aa14.91□□□□□ -0.02
SCFD1-224ENST00000557713 GUCA1CO95843 209 aa14.91□□□□□ -0.02
SCFD1-224ENST00000557713 PTGER1P34995 402 aa14.91□□□□□ -0.02
SCFD1-224ENST00000557713 FNTAP49354 379 aa14.91□□□□□ -0.02
SCFD1-224ENST00000557713 REEP5Q00765 189 aa14.91□□□□□ -0.02
SCFD1-224ENST00000557713 HECTD2Q5U5R9 776 aa14.91□□□□□ -0.02
SCFD1-224ENST00000557713 SBSNQ6UWP8 590 aa14.91□□□□□ -0.02
SCFD1-224ENST00000557713 C3P1Q6ZMU1 363 aa14.91□□□□□ -0.02
SCFD1-224ENST00000557713 POGLUT1Q8NBL1 392 aa14.91□□□□□ -0.02
SCFD1-224ENST00000557713 ACTRT1Q8TDG2 376 aa14.91□□□□□ -0.02
SCFD1-224ENST00000557713 TMEM125Q96AQ2 219 aa14.91□□□□□ -0.02
SCFD1-224ENST00000557713 C14orf79Q96F83 325 aa14.91□□□□□ -0.02
SCFD1-224ENST00000557713 CERS2Q96G23 380 aa14.91□□□□□ -0.02
SCFD1-224ENST00000557713 TREX2Q9BQ50 279 aaPredicted RBP14.91□□□□□ -0.02
SCFD1-224ENST00000557713 NAT9Q9BTE0 207 aa14.91□□□□□ -0.02
SCFD1-224ENST00000557713 DEFB126Q9BYW3 111 aa14.91□□□□□ -0.02
SCFD1-224ENST00000557713 AICDAQ9GZX7 198 aa14.91□□□□□ -0.02
SCFD1-224ENST00000557713 PELI2Q9HAT8 420 aa14.91□□□□□ -0.02
SCFD1-224ENST00000557713 PKDREJQ9NTG1 2253 aa14.91□□□□□ -0.02
SCFD1-224ENST00000557713 ADGRG4Q8IZF6 3080 aa14.91□□□□□ -0.02
SCFD1-224ENST00000557713 PCNX1Q96RV3 2341 aa14.91□□□□□ -0.02
SCFD1-224ENST00000557713 PABPN1LA6NDY0 278 aaKnown RBP14.9□□□□□ -0.02
SCFD1-224ENST00000557713 URADA6NGE7 173 aa14.9□□□□□ -0.02
SCFD1-224ENST00000557713 A8MUA0 341 aa14.9□□□□□ -0.02
SCFD1-224ENST00000557713 C4orf51C9J302 202 aa14.9□□□□□ -0.02
SCFD1-224ENST00000557713 DNALI1O14645 258 aaPredicted RBP14.9□□□□□ -0.02
SCFD1-224ENST00000557713 RNH1P13489 461 aaKnown RBP14.9□□□□□ -0.02
SCFD1-224ENST00000557713 CAPN3P20807 821 aa14.9□□□□□ -0.02
SCFD1-224ENST00000557713 HNF4AP41235 474 aa14.9□□□□□ -0.02
SCFD1-224ENST00000557713 MEOX1P50221 254 aa14.9□□□□□ -0.02
SCFD1-224ENST00000557713 RIPPLY3P57055 190 aa14.9□□□□□ -0.02
SCFD1-224ENST00000557713 PPP1R3AQ16821 1122 aa14.9□□□□□ -0.02
SCFD1-224ENST00000557713 NXPE4Q6UWF7 544 aa14.9□□□□□ -0.02
SCFD1-224ENST00000557713 THOC6Q86W42 341 aaKnown RBP14.9□□□□□ -0.02
SCFD1-224ENST00000557713 SULF2Q8IWU5 870 aa14.9□□□□□ -0.02
SCFD1-224ENST00000557713 CA13Q8N1Q1 262 aa14.9□□□□□ -0.02
SCFD1-224ENST00000557713 APCDD1LQ8NCL9 501 aa14.9□□□□□ -0.02
SCFD1-224ENST00000557713 C16orf52Q8NHV5 167 aa14.9□□□□□ -0.02
SCFD1-224ENST00000557713 CREB3L4Q8TEY5 395 aa14.9□□□□□ -0.02
SCFD1-224ENST00000557713 TSNARE1Q96NA8 513 aa14.9□□□□□ -0.02
SCFD1-224ENST00000557713 ITGB1BP2Q9UKP3 347 aa14.9□□□□□ -0.02
SCFD1-224ENST00000557713 CORO1CQ9ULV4 474 aaPredicted RBP14.9□□□□□ -0.02
SCFD1-224ENST00000557713 HRH3Q9Y5N1 445 aa14.9□□□□□ -0.02
SCFD1-224ENST00000557713 KLRC4-KLRK1H3BQV0 150 aa14.89□□□□□ -0.03
SCFD1-224ENST00000557713 PSMD12O00232 456 aaPredicted RBP14.89□□□□□ -0.03
SCFD1-224ENST00000557713 FCHO1O14526 889 aa14.89□□□□□ -0.03
SCFD1-224ENST00000557713 NRDCO43847 1150 aa14.89□□□□□ -0.03
SCFD1-224ENST00000557713 PEX1O43933 1283 aa14.89□□□□□ -0.03
SCFD1-224ENST00000557713 SERPINA6P08185 405 aa14.89□□□□□ -0.03
SCFD1-224ENST00000557713 RBBP5Q15291 538 aaKnown RBP14.89□□□□□ -0.03
SCFD1-224ENST00000557713 PPP1R7Q15435 360 aa14.89□□□□□ -0.03
SCFD1-224ENST00000557713 FAM45BPQ6NSW5 357 aa14.89□□□□□ -0.03
SCFD1-224ENST00000557713 CEP97Q8IW35 865 aa14.89□□□□□ -0.03
SCFD1-224ENST00000557713 EID3Q8N140 333 aa14.89□□□□□ -0.03
SCFD1-224ENST00000557713 GPATCH11Q8N954 259 aa14.89□□□□□ -0.03
SCFD1-224ENST00000557713 B3GNT7Q8NFL0 401 aa14.89□□□□□ -0.03
SCFD1-224ENST00000557713 FAM57AQ8TBR7 257 aa14.89□□□□□ -0.03
SCFD1-224ENST00000557713 FAM45AQ8TCE6 357 aa14.89□□□□□ -0.03
SCFD1-224ENST00000557713 SDCCAG3Q96C92 435 aa14.89□□□□□ -0.03
SCFD1-224ENST00000557713 AIF1LQ9BQI0 150 aa14.89□□□□□ -0.03
SCFD1-224ENST00000557713 RHBGQ9H310 441 aa14.89□□□□□ -0.03
SCFD1-224ENST00000557713 PPIEQ9UNP9 301 aaKnown RBP14.89□□□□□ -0.03
SCFD1-224ENST00000557713 SLC22A14Q9Y267 594 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms