RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 FXYD1O00168 92 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 KPNA4O00629 521 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-241ENST00000556374 SYN3O14994 580 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 INSIG1O15503 277 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 HS6ST1O60243 411 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 RECQL5O94762 991 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-241ENST00000556374 WISP3O95389 354 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-241ENST00000556374 CPNE6O95741 557 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 ASGR1P07306 291 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 MMP2P08253 660 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 ALOX5P09917 674 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 OR4Q2P0C623 313 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 CLEC2LP0C7M8 214 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 HAPLN1P10915 354 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-241ENST00000556374 MTHFD1P11586 935 aaKnown RBP4.26□□□□□ -1.73
ATXN3-241ENST00000556374 ARSAP15289 507 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 NCK1P16333 377 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF12P17014 697 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF7P17097 686 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-241ENST00000556374 ITGALP20701 1170 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 SLC6A2P23975 617 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 OXTRP30559 389 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 HOXC8P31273 242 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 CD52P31358 61 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 APOBEC3AP31941 199 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-241ENST00000556374 MTHFRP42898 656 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 PTGER3P43115 390 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 PSMD7P51665 324 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF140P52738 457 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-241ENST00000556374 ARSFP54793 590 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 CDH4P55283 916 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 ARPP19P56211 112 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 RPL38P63173 70 aaKnown RBP4.26□□□□□ -1.73
ATXN3-241ENST00000556374 GNA12Q03113 381 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 EMX2Q04743 252 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 MGAT3Q09327 533 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 TWF1Q12792 350 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 ELAVL2Q12926 359 aaKnown RBP4.26□□□□□ -1.73
ATXN3-241ENST00000556374 TRAF2Q12933 501 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF177Q13360 481 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-241ENST00000556374 IL18R1Q13478 541 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 NR1D2Q14995 579 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 MAPKAPK3Q16644 382 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 SMU1Q2TAY7 513 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 FAM214AQ32MH5 1076 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF829Q3KNS6 432 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-241ENST00000556374 SLC44A4Q53GD3 710 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 ALFQ53S48 1182 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 XKR7Q5GH72 579 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 OTUD3Q5T2D3 398 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-241ENST00000556374 GLYATQ6IB77 296 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 FBXL22Q6P050 247 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 FAM180AQ6UWF9 173 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 CERS6Q6ZMG9 384 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 TMEM26Q6ZUK4 368 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 LRRC8DQ7L1W4 858 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 SCD5Q86SK9 330 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 SYVN1Q86TM6 617 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 ADCK1Q86TW2 530 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 SERINC5Q86VE9 423 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 ADGRG3Q86Y34 549 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 HIPK1Q86Z02 1210 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 LYSMD2Q8IV50 215 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 FUNDC1Q8IVP5 155 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 CPNE9Q8IYJ1 553 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 NXPE1Q8N323 547 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 TMEM132CQ8N3T6 1108 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 TTC30BQ8N4P2 665 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 TMCO5AQ8N6Q1 288 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 PCSK9Q8NBP7 692 aaKnown RBP4.26□□□□□ -1.73
ATXN3-241ENST00000556374 PAPD5Q8NDF8 572 aaKnown RBP4.26□□□□□ -1.73
ATXN3-241ENST00000556374 OR2T12Q8NG77 320 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 OR4K2Q8NGD2 314 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 OR13C4Q8NGS5 318 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 METTL6Q8TCB7 284 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 GIPC3Q8TF64 312 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 C2orf15Q8WU43 125 aaKnown RBP4.26□□□□□ -1.73
ATXN3-241ENST00000556374 SNRNP27Q8WVK2 155 aaKnown RBP4.26□□□□□ -1.73
ATXN3-241ENST00000556374 SLC13A3Q8WWT9 602 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 S100ZQ8WXG8 99 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 FIG4Q92562 907 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 HDAC2Q92769 488 aaKnown RBP4.26□□□□□ -1.73
ATXN3-241ENST00000556374 SLC39A13Q96H72 371 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 C3orf30Q96M34 536 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 COG8Q96MW5 612 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 CCDC115Q96NT0 180 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 KCNA7Q96RP8 456 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 TRIB3Q96RU7 358 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 PKMYT1Q99640 499 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 GPR21Q99679 349 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 SLC29A1Q99808 456 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 ADAM2Q99965 735 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 BCL7BQ9BQE9 202 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 MGME1Q9BQP7 344 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 CHID1Q9BWS9 393 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 TDRD1Q9BXT4 1180 aaKnown RBP4.26□□□□□ -1.73
ATXN3-241ENST00000556374 FAM126AQ9BYI3 521 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-241ENST00000556374 GPR63Q9BZJ6 419 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 CCDC90BQ9GZT6 254 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 PAIP1Q9H074 479 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms