RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 FAM207AQ9NSI2 230 aaPredicted RBP4.15□□□□□ -1.75
PRPF39-209ENST00000556353 PRR34Q9NV39 138 aa4.15□□□□□ -1.75
PRPF39-209ENST00000556353 STUB1Q9UNE7 303 aa4.15□□□□□ -1.75
PRPF39-209ENST00000556353 EXOC6BQ9Y2D4 811 aa4.15□□□□□ -1.75
PRPF39-209ENST00000556353 MYO7AQ13402 2215 aa4.15□□□□□ -1.75
PRPF39-209ENST00000556353 PRRC2BQ5JSZ5 2229 aaKnown RBP4.15□□□□□ -1.75
PRPF39-209ENST00000556353 TANC1Q9C0D5 1861 aa4.15□□□□□ -1.75
PRPF39-209ENST00000556353 PFASO15067 1338 aa4.15□□□□□ -1.75
PRPF39-209ENST00000556353 KIAA1217Q5T5P2 1943 aa4.15□□□□□ -1.75
PRPF39-209ENST00000556353 DOCK5Q9H7D0 1870 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 C2orf81A6NN90 581 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 MPTX1A8MV57 137 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 BAIAP3O94812 1187 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 RPN1P04843 607 aaKnown RBP4.14□□□□□ -1.75
PRPF39-209ENST00000556353 SLC2A2P11168 524 aaPredicted RBP4.14□□□□□ -1.75
PRPF39-209ENST00000556353 TNFAIP3P21580 790 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 KRTAP5-9P26371 169 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 TMEM50BP56557 158 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 BACE1P56817 501 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 HMGN5P82970 282 aaKnown RBP4.14□□□□□ -1.75
PRPF39-209ENST00000556353 WASHC5Q12768 1159 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 COX10Q12887 443 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 TAF10Q12962 218 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 CCL14Q16627 93 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 C1QTNF12Q5T7M4 302 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 NAA16Q6N069 864 aaPredicted RBP4.14□□□□□ -1.75
PRPF39-209ENST00000556353 TEX38Q6PEX7 206 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 CHCHD4Q8N4Q1 142 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 MCUQ8NE86 351 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 NUP37Q8NFH4 326 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 OR1L3Q8NH93 324 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 ACER1Q8TDN7 264 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 CDHR1Q96JP9 859 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 PRICKLE1Q96MT3 831 aaPredicted RBP4.14□□□□□ -1.75
PRPF39-209ENST00000556353 MS4A10Q96PG2 267 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 RIOK1Q9BRS2 568 aaKnown RBP4.14□□□□□ -1.75
PRPF39-209ENST00000556353 ALDH8A1Q9H2A2 487 aaPredicted RBP4.14□□□□□ -1.75
PRPF39-209ENST00000556353 TSPY26PQ9H489 355 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 MORF4L1Q9UBU8 362 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 MAN1B1Q9UKM7 699 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 ISY1Q9ULR0 285 aaKnown RBP4.14□□□□□ -1.75
PRPF39-209ENST00000556353 MYH7BA7E2Y1 1941 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 CFAP54Q96N23 3096 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 CROCCQ5TZA2 2017 aa4.14□□□□□ -1.75
PRPF39-209ENST00000556353 SCN10AQ9Y5Y9 1956 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 PES1O00541 588 aaKnown RBP4.13□□□□□ -1.75
PRPF39-209ENST00000556353 SURF6O75683 361 aaKnown RBP4.13□□□□□ -1.75
PRPF39-209ENST00000556353 IGHDP01880 384 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 CCND3P30281 292 aaPredicted RBP4.13□□□□□ -1.75
PRPF39-209ENST00000556353 TRPC1P48995 793 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 GSTO1P78417 241 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 GCNT1Q02742 428 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 GUCY2DQ02846 1103 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 GABPAQ06546 454 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 PAX8Q06710 450 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 ZNF415Q09FC8 603 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 IFT88Q13099 833 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 PEX6Q13608 980 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 TATDN1Q6P1N9 297 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 ADIPOR2Q86V24 386 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 ITPRIPQ8IWB1 547 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 LINC00612Q8N6U2 182 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 TRPV1Q8NER1 839 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 GATAD1Q8WUU5 269 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 ERP27Q96DN0 273 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 C12orf42Q96LP6 360 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 TIGD1Q96MW7 591 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 OLFM1Q99784 485 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 THAP2Q9H0W7 228 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 MED20Q9H944 212 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 DPP3Q9NY33 737 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 SUN2Q9UH99 717 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 ZNF215Q9UL58 517 aaPredicted RBP4.13□□□□□ -1.75
PRPF39-209ENST00000556353 ZBED9Q6R2W3 1325 aa4.13□□□□□ -1.75
PRPF39-209ENST00000556353 LOC100509620A0A075B734 347 aa4.12□□□□□ -1.75
PRPF39-209ENST00000556353 A0A1W2PQ09 198 aa4.12□□□□□ -1.75
PRPF39-209ENST00000556353 A0A1W2PR80 420 aa4.12□□□□□ -1.75
PRPF39-209ENST00000556353 MEIS2O14770 477 aa4.12□□□□□ -1.75
PRPF39-209ENST00000556353 CTAGE5O15320 804 aa4.12□□□□□ -1.75
PRPF39-209ENST00000556353 PRKAB2O43741 272 aa4.12□□□□□ -1.75
PRPF39-209ENST00000556353 KIF5CO60282 957 aa4.12□□□□□ -1.75
PRPF39-209ENST00000556353 ZBED4O75132 1171 aa4.12□□□□□ -1.75
PRPF39-209ENST00000556353 IDH1O75874 414 aaKnown RBP4.12□□□□□ -1.75
PRPF39-209ENST00000556353 DDHD2O94830 711 aa4.12□□□□□ -1.75
PRPF39-209ENST00000556353 IGHV3-13P01766 116 aa4.12□□□□□ -1.75
PRPF39-209ENST00000556353 TPM2P07951 284 aa4.12□□□□□ -1.75
PRPF39-209ENST00000556353 ASNSP08243 561 aa4.12□□□□□ -1.75
PRPF39-209ENST00000556353 CCDC159P0C7I6 412 aa4.12□□□□□ -1.75
PRPF39-209ENST00000556353 UQCRFS1P1P0C7P4 283 aa4.12□□□□□ -1.75
PRPF39-209ENST00000556353 TRIM21P19474 475 aaKnown RBP4.12□□□□□ -1.75
PRPF39-209ENST00000556353 CYP2B6P20813 491 aa4.12□□□□□ -1.75
PRPF39-209ENST00000556353 JAK1P23458 1154 aa4.12□□□□□ -1.75
PRPF39-209ENST00000556353 PSMA3P25788 255 aa4.12□□□□□ -1.75
PRPF39-209ENST00000556353 PTPN3P26045 913 aa4.12□□□□□ -1.75
PRPF39-209ENST00000556353 CSTF2P33240 577 aaKnown RBP eCLIP4.12□□□□□ -1.75
PRPF39-209ENST00000556353 MATR3P43243 847 aaKnown RBP eCLIP4.12□□□□□ -1.75
PRPF39-209ENST00000556353 TSFMP43897 325 aaKnown RBP4.12□□□□□ -1.75
PRPF39-209ENST00000556353 UBXN2AP68543 259 aa4.12□□□□□ -1.75
PRPF39-209ENST00000556353 MC1RQ01726 317 aa4.12□□□□□ -1.75
PRPF39-209ENST00000556353 TMED1Q13445 227 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms