RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 TTC27Q6P3X3 843 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 HOOK3Q86VS8 718 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 KLHL7Q8IXQ5 586 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 FAM89BQ8N5H3 189 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 SLC37A3Q8NCC5 494 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 SLC26A7Q8TE54 656 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 AFAP1L1Q8TED9 768 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 GRK7Q8WTQ7 553 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 TEKT1Q969V4 418 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 BSCL2Q96G97 398 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-218ENST00000556256 VMP1Q96GC9 406 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 RBM41Q96IZ5 413 aaKnown RBP2.49□□□□□ -2.01
SCFD1-218ENST00000556256 CNOT6LQ96LI5 555 aaKnown RBP2.49□□□□□ -2.01
SCFD1-218ENST00000556256 AK8Q96MA6 479 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 ATG101Q9BSB4 218 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 RIMS4Q9H426 269 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-218ENST00000556256 EGLN3Q9H6Z9 239 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 SPHK2Q9NRA0 654 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.49□□□□□ -2.01
SCFD1-218ENST00000556256 DNAJC17Q9NVM6 304 aaKnown RBP2.49□□□□□ -2.01
SCFD1-218ENST00000556256 CNIH4Q9P003 139 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 SEPT10Q9P0V9 454 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 VPS18Q9P253 973 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 C19orf25Q9UFG5 118 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-218ENST00000556256 ARMCX3Q9UH62 379 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-218ENST00000556256 IL36AQ9UHA7 158 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 ZNF107Q9UII5 783 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-218ENST00000556256 NOCTQ9UK39 431 aaKnown RBP2.49□□□□□ -2.01
SCFD1-218ENST00000556256 PILRBQ9UKJ0 227 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 PRDM4Q9UKN5 801 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 ELF5Q9UKW6 265 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-218ENST00000556256 POMT2Q9UKY4 750 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 HBS1LQ9Y450 684 aaKnown RBP2.49□□□□□ -2.01
SCFD1-218ENST00000556256 TRAV18A0A075B6X5 111 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 KBTBD13C9JR72 458 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 SLC33A1O00400 549 aaPredicted RBP2.48□□□□□ -2.01
SCFD1-218ENST00000556256 MAGEC1O60732 1142 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 FMO6PO60774 539 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 NME6O75414 186 aaPredicted RBP2.48□□□□□ -2.01
SCFD1-218ENST00000556256 HPRP00739 348 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 YES1P07947 543 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 DLATP10515 647 aaKnown RBP2.48□□□□□ -2.01
SCFD1-218ENST00000556256 CYP2A7P20853 494 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 IL4RP24394 825 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 CCND3P30281 292 aaPredicted RBP2.48□□□□□ -2.01
SCFD1-218ENST00000556256 SFTPDP35247 375 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 OR3A2P47893 321 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 CLDN17P56750 224 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 GUCY2DQ02846 1103 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 FOLH1Q04609 750 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 RFTN1Q14699 578 aaPredicted RBP2.48□□□□□ -2.01
SCFD1-218ENST00000556256 EFTUD2Q15029 972 aaKnown RBP eCLIP2.48□□□□□ -2.01
SCFD1-218ENST00000556256 MOGAT2Q3SYC2 334 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 IQCCQ4KMZ1 466 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 ZNF789Q5FWF6 425 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 SLC10A5Q5PT55 438 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 FAM46CQ5VWP2 391 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 OR4C11Q6IEV9 310 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 CASC4Q6P4E1 433 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 FUT10Q6P4F1 479 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 PODNL1Q6PEZ8 512 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 PRUNE1Q86TP1 453 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 SYCP3Q8IZU3 236 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 GPC2Q8N158 579 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 PRSS35Q8N3Z0 413 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 NIPA2Q8N8Q9 360 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 CCDC63Q8NA47 563 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 ARHGAP45Q92619 1136 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 ATP6V1E2Q96A05 226 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 PDLIM5Q96HC4 596 aaKnown RBP2.48□□□□□ -2.01
SCFD1-218ENST00000556256 FAM218AQ96MZ4 157 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 TSSK2Q96PF2 358 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 BTBD9Q96Q07 612 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 ALKBH7Q9BT30 221 aaPredicted RBP2.48□□□□□ -2.01
SCFD1-218ENST00000556256 UTP14AQ9BVJ6 771 aaKnown RBP2.48□□□□□ -2.01
SCFD1-218ENST00000556256 TDRD1Q9BXT4 1180 aaKnown RBP2.48□□□□□ -2.01
SCFD1-218ENST00000556256 DNAI2Q9GZS0 605 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 LSG1Q9H089 658 aaKnown RBP2.48□□□□□ -2.01
SCFD1-218ENST00000556256 FAM49AQ9H0Q0 323 aaPredicted RBP2.48□□□□□ -2.01
SCFD1-218ENST00000556256 C5orf66Q9H5L9 145 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 C10orf88Q9H8K7 445 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 SRD5A3Q9H8P0 318 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 PPANQ9NQ55 473 aaKnown RBP2.48□□□□□ -2.01
SCFD1-218ENST00000556256 MRPL17Q9NRX2 175 aaKnown RBP2.48□□□□□ -2.01
SCFD1-218ENST00000556256 PNPLA3Q9NST1 481 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 B4GALT7Q9UBV7 327 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 FBXL4Q9UKA2 621 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 AGTPBP1Q9UPW5 1226 aa2.48□□□□□ -2.01
SCFD1-218ENST00000556256 RUVBL2Q9Y230 463 aaKnown RBP2.48□□□□□ -2.01
SCFD1-218ENST00000556256 ZNF256Q9Y2P7 627 aaPredicted RBP2.48□□□□□ -2.01
SCFD1-218ENST00000556256 A0A1W2PR80 420 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 C15orf61A6NNL5 157 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 H0YIG0 161 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 H3BMM5 538 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 CTDSPLO15194 276 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 GH1P01241 217 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 ELAVL4P26378 380 aaKnown RBP2.47□□□□□ -2.01
SCFD1-218ENST00000556256 CETN2P41208 172 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 NPBWR1P48145 328 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 ADARP55265 1226 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms