RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 GREB1LQ9C091 1923 aaPredicted RBP4.83□□□□□ -1.64
VRK1-203ENST00000555067 A0A0U1RRA0 63 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 TMEM129A0AVI4 362 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 ANTXRLA6NF34 631 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 ERI2A8K979 691 aaKnown RBP4.82□□□□□ -1.64
VRK1-203ENST00000555067 FAM25EA8MYX2 175 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 SLC28A1O00337 649 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 PSMD3O43242 534 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 TLX2O43763 284 aaPredicted RBP4.82□□□□□ -1.64
VRK1-203ENST00000555067 ATP6AP2O75787 350 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 AMBPP02760 352 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 ZCCHC18P0CG32 403 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 CALCBP10092 127 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 DLATP10515 647 aaKnown RBP4.82□□□□□ -1.64
VRK1-203ENST00000555067 CLUP10909 449 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 DRD5P21918 477 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 ELAVL4P26378 380 aaKnown RBP4.82□□□□□ -1.64
VRK1-203ENST00000555067 SH3BGRP55822 239 aaPredicted RBP4.82□□□□□ -1.64
VRK1-203ENST00000555067 TAS2R38P59533 333 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 PNRC1Q12796 327 aaPredicted RBP4.82□□□□□ -1.64
VRK1-203ENST00000555067 LCP2Q13094 533 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 MXD4Q14582 209 aaPredicted RBP4.82□□□□□ -1.64
VRK1-203ENST00000555067 CFAP221Q4G0U5 840 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 SYT14P1Q58G82 188 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 GCNT6Q5T4J0 391 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 AGAP6Q5VW22 663 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 ARHGAP17Q68EM7 881 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 PM20D1Q6GTS8 502 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 TRNP1Q6NT89 227 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 ADGRD2Q7Z7M1 963 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 KMT5CQ86Y97 462 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 ODF3L1Q8IXM7 274 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.82□□□□□ -1.64
VRK1-203ENST00000555067 SPEM1Q8N4L4 309 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 MINDY2Q8NBR6 621 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 FAM71CQ8NEG0 241 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 ACVR1CQ8NER5 493 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 OR13C2Q8NGS9 318 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 OR2T3Q8NH03 318 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 OR4A16Q8NH70 328 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 SMPDL3BQ92485 455 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 P2RX5Q93086 422 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 MAGED4Q96JG8 741 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 PCDHB18PQ96TA0 734 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 COQ7Q99807 217 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 GCOM2Q9BZD3 368 aaPredicted RBP4.82□□□□□ -1.64
VRK1-203ENST00000555067 SLC39A8Q9C0K1 460 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 WWTR1Q9GZV5 400 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 ZNF696Q9H7X3 374 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 ROPN1Q9HAT0 212 aaPredicted RBP4.82□□□□□ -1.64
VRK1-203ENST00000555067 IL20RAQ9UHF4 553 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 MGAT4BQ9UQ53 548 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 AMDHD2Q9Y303 409 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 SH3GLB1Q9Y371 365 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 JRKLQ9Y4A0 524 aa4.82□□□□□ -1.64
VRK1-203ENST00000555067 TAF1P21675 1872 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 PRAG1Q86YV5 1406 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 MAGEB16A2A368 324 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 SURF6O75683 361 aaKnown RBP4.81□□□□□ -1.64
VRK1-203ENST00000555067 PRSS1P07477 247 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 STAG3L1P0CL83 205 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 FGF5P12034 268 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 CORO1AP31146 461 aaKnown RBP4.81□□□□□ -1.64
VRK1-203ENST00000555067 TAF6P49848 677 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 MMP15P51511 669 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 CLDN20P56880 219 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 IRX4P78413 519 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 MAT1AQ00266 395 aaKnown RBP4.81□□□□□ -1.64
VRK1-203ENST00000555067 PRKAA1Q13131 559 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 DDX39BQ13838 428 aaKnown RBP4.81□□□□□ -1.64
VRK1-203ENST00000555067 ZMYND11Q15326 602 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 NPTX1Q15818 432 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 FAM109BQ6ICB4 259 aaPredicted RBP4.81□□□□□ -1.64
VRK1-203ENST00000555067 GFRALQ6UXV0 394 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 RUFY3Q7L099 469 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 AMIGO1Q86WK6 493 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 TMEM219Q86XT9 240 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 GRAMD2AQ8IUY3 354 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 STHQ8IWL8 128 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 BMPERQ8N8U9 685 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 LEMD2Q8NC56 503 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 STEAP2Q8NFT2 490 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 OR10T2Q8NGX3 314 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 SAP25Q8TEE9 199 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 FCGR1BQ92637 280 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 ZNF501Q96CX3 271 aaPredicted RBP4.81□□□□□ -1.64
VRK1-203ENST00000555067 TAAR6Q96RI8 345 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 CSTL1Q9H114 145 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 TMEM231Q9H6L2 316 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 FKRPQ9H9S5 495 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 GPR173Q9NS66 373 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 FARSBQ9NSD9 589 aaKnown RBP4.81□□□□□ -1.64
VRK1-203ENST00000555067 TMEM30AQ9NV96 361 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 ATP6V1HQ9UI12 483 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 FBXL2Q9UKC9 423 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 RUVBL2Q9Y230 463 aaKnown RBP4.81□□□□□ -1.64
VRK1-203ENST00000555067 KLK4Q9Y5K2 254 aa4.81□□□□□ -1.64
VRK1-203ENST00000555067 PDS5AQ29RF7 1337 aaKnown RBP4.8□□□□□ -1.64
VRK1-203ENST00000555067 C15orf38-AP3S2A0A0A6YYH1 394 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 PES1O00541 588 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms