RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 RAB36O95755 333 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 CDH1P12830 882 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 EEF1DP3Q658K8 133 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 PHF13Q86YI8 300 aaPredicted RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 MRPL41Q8IXM3 137 aaKnown RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 RBP7Q96R05 134 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 HIPK2Q9H2X6 1198 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 C12orf65Q9H3J6 166 aaKnown RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 TMEM184CQ9NVA4 438 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 SCP2D1Q9UJQ7 156 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 PLLPQ9Y342 182 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 ANKRD33BA6NCL7 494 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 OR51F1A6NGY5 319 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 FTCDNL1E5RQL4 147 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 PDLIM1O00151 329 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 LCKP06239 509 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 BCHEP06276 602 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 FESP07332 822 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 F7P08709 466 aaPredicted RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 MATN1P21941 496 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 NAA10P41227 235 aaPredicted RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 LRRC38Q5VT99 294 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 DQX1Q8TE96 717 aaKnown RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 HOXB13Q92826 284 aaPredicted RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 PSMG2Q969U7 264 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 CD180Q99467 661 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 C7orf50Q9BRJ6 194 aaKnown RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 ENAMQ9NRM1 1142 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 CXXC1Q9P0U4 656 aaPredicted RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 PCDHGA2Q9Y5H1 932 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF99A8MXY4 864 aaPredicted RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 I3L521 148 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 IFNA4P05014 189 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 CD36P16671 472 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 ALDH3B1P43353 468 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 CDONQ4KMG0 1287 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 IGFN1Q86VF2 1251 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 CCM2Q9BSQ5 444 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 NAA11Q9BSU3 229 aaPredicted RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 RHCGQ9UBD6 479 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 PADI3Q9ULW8 664 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 SLC22A14Q9Y267 594 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 RTCAO00442 366 aaKnown RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 TGDSO95455 350 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 SPTBP11277 2137 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 S1PR1P21453 382 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 DDR1Q08345 913 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF616Q08AN1 781 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 NTRK3Q16288 839 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 LILRB2Q8N423 598 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 WFIKKN2Q8TEU8 576 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 HAPLN3Q96S86 360 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 GPR20Q99678 358 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 OR2S2Q9NQN1 319 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 ACAD8Q9UKU7 415 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 A0A087WUU8 490 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 GAS6Q14393 721 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 CEACAM20Q6UY09 585 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF572Q7Z3I7 529 aaPredicted RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 TAC4Q86UU9 113 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 HDAC2Q92769 488 aaKnown RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 ACDQ96AP0 544 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 TMCO6Q96DC7 493 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 LRFN5Q96NI6 719 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 RNF215Q9Y6U7 377 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 TRBC2A0A5B9 178 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 CDRT1O95170 752 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 GBAP04062 536 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 MAPK3P27361 379 aaPredicted RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 LSSP48449 732 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 PSMA6P60900 246 aaKnown RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 TRIM46Q7Z4K8 759 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 RNF130Q86XS8 419 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 GLIS3Q8NEA6 775 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF681Q96N22 645 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 PDZD7Q9H5P4 517 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 DHDHQ9UQ10 334 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 OTOFQ9HC10 1997 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 ACOT7O00154 380 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 SYN3O14994 580 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 ACOX3O15254 700 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 CD79AP11912 226 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 GRIA1P42261 906 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 SMSP52788 366 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 NUDT6P53370 316 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 RRAS2P62070 204 aaPredicted RBP6.66□□□□□ -1.34
SYNE2-216ENST00000555002 CDK3Q00526 305 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 GSTM4Q03013 218 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 PLCXD2Q0VAA5 305 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 TMEM44Q2T9K0 475 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 KCNK18Q7Z418 384 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 VSIG10LQ86VR7 867 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 ERI1Q8IV48 349 aaKnown RBP6.66□□□□□ -1.34
SYNE2-216ENST00000555002 OR5K1Q8NHB7 308 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 MAGED1Q9Y5V3 778 aaPredicted RBP6.66□□□□□ -1.34
SYNE2-216ENST00000555002 INPPL1O15357 1258 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 HCRTR2O43614 444 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 PRKD3O94806 890 aa6.66□□□□□ -1.34
SYNE2-216ENST00000555002 IL1AP01583 271 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms