RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 COPS3Q9UNS2 423 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 RUVBL2Q9Y230 463 aaKnown RBP4.26□□□□□ -1.73
ATXN3-227ENST00000554491 ANKRD6Q9Y2G4 727 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 PLLPQ9Y342 182 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 NID2Q14112 1375 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 SERTM2A0A1B0GWG4 89 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 FAM92AA1XBS5 289 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 LINC00862A6NCI5 91 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 A6NL46 340 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 E9PAM4 449 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 I3L4J1 428 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 ITGB1BP1O14713 200 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 GABRDO14764 452 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF213O14771 459 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 GRM6O15303 877 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 MBTPS2O43462 519 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 NUDT21O43809 227 aaKnown RBP4.25□□□□□ -1.73
ATXN3-227ENST00000554491 JAK2O60674 1132 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 DUSP11O75319 330 aaKnown RBP4.25□□□□□ -1.73
ATXN3-227ENST00000554491 FLNBO75369 2602 aaKnown RBP4.25□□□□□ -1.73
ATXN3-227ENST00000554491 NOL4O94818 638 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 TNFAIP8O95379 198 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 CTDNEP1O95476 244 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 LDOC1O95751 146 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-227ENST00000554491 BMP15O95972 392 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 CSTAP01040 98 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 S100A8P05109 93 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 PRKCBP05771 671 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 PROS1P07225 676 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 HOXD4P09016 255 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-227ENST00000554491 CD48P09326 243 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 UQCRFS1P1P0C7P4 283 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 ODC1P11926 461 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 CDH1P12830 882 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 ATP1A3P13637 1013 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 CCDC130P13994 396 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 PPP3CBP16298 524 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF8P17098 575 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-227ENST00000554491 CKMT2P17540 419 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 GM2AP17900 193 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 POU1F1P28069 291 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 PTPN4P29074 926 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 CRABP1P29762 137 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 TOB1P50616 345 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-227ENST00000554491 CLCNKBP51801 687 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 STARD6P59095 220 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 TAS2R40P59535 323 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 CTXN1P60606 82 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 TNFAIP2Q03169 654 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 LRRC63Q05C16 580 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 SLC3A1Q07837 685 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 CDH17Q12864 832 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 DLG1Q12959 904 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 CHIT1Q13231 466 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 APOFQ13790 326 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 GBX1Q14549 363 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 MTF1Q14872 753 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 PDK3Q15120 406 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 ETFDHQ16134 617 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 C2orf76Q3KRA6 126 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 FLYWCH1Q4VC44 716 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 ATAT1Q5SQI0 421 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 IFIT1BQ5T764 474 aaKnown RBP4.25□□□□□ -1.73
ATXN3-227ENST00000554491 TCEAL6Q6IPX3 200 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 TTI2Q6NXR4 508 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 XKRXQ6PP77 449 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 IL27RAQ6UWB1 636 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 UGT2A3Q6UWM9 527 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 EFL1Q7Z2Z2 1120 aaKnown RBP4.25□□□□□ -1.73
ATXN3-227ENST00000554491 DEFB128Q7Z7B8 93 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 FAM131BQ86XD5 332 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 THEM5Q8N1Q8 247 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 SLC35F6Q8N357 371 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 KIF2BQ8N4N8 673 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 SLC25A41Q8N5S1 370 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 CELF5Q8N6W0 485 aaKnown RBP4.25□□□□□ -1.73
ATXN3-227ENST00000554491 IL17RCQ8NAC3 791 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 BBS1Q8NFJ9 593 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 NLGN4YQ8NFZ3 816 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-227ENST00000554491 OR8J2Q8NGG1 315 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 DTX3LQ8TDB6 740 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 TRAPPC12Q8WVT3 735 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 STMN2Q93045 179 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 EXT2Q93063 718 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 TCEAL3Q969E4 200 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 MTFMTQ96DP5 389 aaKnown RBP4.25□□□□□ -1.73
ATXN3-227ENST00000554491 MRPL38Q96DV4 380 aaKnown RBP4.25□□□□□ -1.73
ATXN3-227ENST00000554491 SPACA9Q96E40 222 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-227ENST00000554491 MCRS1Q96EZ8 462 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 PGAP3Q96FM1 320 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-227ENST00000554491 ZFYVE19Q96K21 471 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 FOPNLQ96NB1 174 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 LRFN5Q96NI6 719 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 KLHL32Q96NJ5 620 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 PYM1Q9BRP8 204 aaKnown RBP4.25□□□□□ -1.73
ATXN3-227ENST00000554491 SPXQ9BT56 116 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 CRB3Q9BUF7 120 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 C1orf50Q9BV19 199 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 TTLL2Q9BWV7 592 aa4.25□□□□□ -1.73
ATXN3-227ENST00000554491 BBS2Q9BXC9 721 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms