RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 ZNF501Q96CX3 271 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-210ENST00000553950 RTKNQ9BST9 563 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 NDC1Q9BTX1 674 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 MRPL1Q9BYD6 325 aaKnown RBP13.81□□□□□ -0.2
SHMT2-210ENST00000553950 OR51B5Q9H339 312 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 ANKHQ9HCJ1 492 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 AIG1Q9NVV5 245 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 LYARQ9NX58 379 aaKnown RBP13.81□□□□□ -0.2
SHMT2-210ENST00000553950 CLCA2Q9UQC9 943 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 POLR3HQ9Y535 204 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-210ENST00000553950 SPACA6W5XKT8 324 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 CCDC187A0A096LP49 1063 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 LOC105369274A0A096LPK9 316 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 LOC102723532A0A0G2JNH3 316 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 GNG14A0A1W2PPG7 69 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 P2RX6O15547 441 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 PRMT3O60678 531 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 CSO75390 466 aaKnown RBP13.8□□□□□ -0.2
SHMT2-210ENST00000553950 ETHE1O95571 254 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 MT-CO3P00414 261 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 ALOX12P18054 663 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 NOVA1P51513 510 aaKnown RBP13.8□□□□□ -0.2
SHMT2-210ENST00000553950 MTTPP55157 894 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 TRA2BP62995 288 aaKnown RBP13.8□□□□□ -0.2
SHMT2-210ENST00000553950 SIM1P81133 766 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-210ENST00000553950 HYAL2Q12891 473 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 RPS6KA2Q15349 733 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 GPR19Q15760 415 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 ISXQ2M1V0 245 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 HES3Q5TGS1 186 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 OR4C11Q6IEV9 310 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 NOXRED1Q6NXP6 359 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 ABHD17CQ6PCB6 329 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 CYP20A1Q6UW02 462 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 PPP1R3BQ86XI6 285 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 OR4N4Q8N0Y3 316 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 RCBTB1Q8NDN9 531 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 APIPQ96GX9 242 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 LRRC37BQ96QE4 947 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 TEFMQ96QE5 360 aaKnown RBP13.8□□□□□ -0.2
SHMT2-210ENST00000553950 F2RL3Q96RI0 385 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 SERINC2Q96SA4 455 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 C17orf62Q9BQA9 187 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 ZPBPQ9BS86 351 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 NPLQ9BXD5 320 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-210ENST00000553950 BRINP2Q9C0B6 783 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 SLC7A5P2Q9GIP4 190 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 DDX31Q9H8H2 851 aaKnown RBP13.8□□□□□ -0.2
SHMT2-210ENST00000553950 CDC14AQ9UNH5 594 aa13.8□□□□□ -0.2
SHMT2-210ENST00000553950 NUP210LQ5VU65 1888 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 HYKKA2RU49 373 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 EFCAB7A8K855 629 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 TM4SF5O14894 197 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 B3GALT2O43825 422 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 PRAMEF10O60809 474 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 ZNF888P0CJ79 500 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-210ENST00000553950 FGF5P12034 268 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 FOLR1P15328 257 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 NCF2P19878 526 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-210ENST00000553950 HIST1H1TP22492 207 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-210ENST00000553950 HPCAL1P37235 193 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 AVPR1BP47901 424 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 MAPK12P53778 367 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 PLA2G16P53816 162 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 CLNS1AP54105 237 aaKnown RBP13.79□□□□□ -0.2
SHMT2-210ENST00000553950 FOXM1Q08050 763 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 KCNAB1Q14722 419 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 C16orf72Q14CZ0 275 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 KIAA0040Q15053 153 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 MAPRE2Q15555 327 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 DPY19L1Q2PZI1 675 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 HKDC1Q2TB90 917 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 PDCD4Q53EL6 469 aaKnown RBP13.79□□□□□ -0.2
SHMT2-210ENST00000553950 CCNYL2Q5T2Q4 361 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 PRMT9Q6P2P2 845 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 DHRS13Q6UX07 377 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 CEACAM20Q6UY09 585 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 B3GNT8Q7Z7M8 397 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 TMPRSS12Q86WS5 348 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 MIER2Q8N344 545 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 GALNT15Q8N3T1 639 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 RNF175Q8N4F7 328 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 ZCCHC10Q8TBK6 192 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 PROKR1Q8TCW9 393 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 UTP15Q8TED0 518 aaKnown RBP13.79□□□□□ -0.2
SHMT2-210ENST00000553950 C11orf24Q96F05 449 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-210ENST00000553950 OR6C1Q96RD1 312 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 ZBTB18Q99592 522 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 FAIM2Q9BWQ8 316 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 PRDM9Q9NQV7 894 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 FBXO8Q9NRD0 319 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 TXLNGQ9NUQ3 528 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 MS4A12Q9NXJ0 267 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 ZIM2Q9NZV7 527 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 HEY2Q9UBP5 337 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 PHF11Q9UIL8 331 aa13.79□□□□□ -0.2
SHMT2-210ENST00000553950 BLACEA4D250 179 aa13.78□□□□□ -0.2
SHMT2-210ENST00000553950 H0YIG0 161 aa13.78□□□□□ -0.2
SHMT2-210ENST00000553950 POLR1CO15160 346 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-210ENST00000553950 NSA2O95478 260 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms