RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 A8MUI8 341 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 FOXO6A8MYZ6 492 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 F8W8V4 182 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 PRRG2O14669 202 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 PRMT5O14744 637 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-219ENST00000553488 NME2P1O60361 137 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 MFAP3LO75121 409 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 VPS26AO75436 327 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 SP1P08047 785 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 ANXA5P08758 320 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 IMPDH2P12268 514 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 KLK2P20151 261 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 CMPK1P30085 196 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 FOXD4Q12950 439 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-219ENST00000553488 TRIM14Q14142 442 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 FAM53BQ14153 422 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 TMED2Q15363 201 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 MEP1AQ16819 746 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 TSTD2Q5T7W7 516 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 CCDC181Q5TID7 509 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 AADACL2Q6P093 401 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 DARS2Q6PI48 645 aaKnown RBP6.83□□□□□ -1.32
ATXN3-219ENST00000553488 PRSS41Q7RTY9 318 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-219ENST00000553488 ANKRD37Q7Z713 158 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 LDB1Q86U70 411 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-219ENST00000553488 TMEM200AQ86VY9 491 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 LGI4Q8N135 537 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 RPRMLQ8N4K4 120 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 CPSF7Q8N684 471 aaKnown RBP6.83□□□□□ -1.32
ATXN3-219ENST00000553488 DNAAF3Q8N9W5 541 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 OR52K1Q8NGK4 314 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 OR4L1Q8NH43 312 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 FAM57AQ8TBR7 257 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 M1APQ8TC57 530 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 NINJ1Q92982 152 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 LRRC45Q96CN5 670 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 CCDC42Q96M95 316 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 CYTH2Q99418 400 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 OLFM1Q99784 485 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 UTP23Q9BRU9 249 aaKnown RBP6.83□□□□□ -1.32
ATXN3-219ENST00000553488 ANP32EQ9BTT0 268 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 G6PC3Q9BUM1 346 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 ACAT2Q9BWD1 397 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 TSSK1BQ9BXA7 367 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 KCNK13Q9HB14 408 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 MRPS30Q9NP92 439 aaKnown RBP6.83□□□□□ -1.32
ATXN3-219ENST00000553488 MMP25Q9NPA2 562 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 COQ3Q9NZJ6 369 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 MARCH4Q9P2E8 410 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-219ENST00000553488 KCNN3Q9UGI6 736 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 GNPTGQ9UJJ9 305 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 TTC7AQ9ULT0 858 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-219ENST00000553488 TFR2Q9UP52 801 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 RNF6Q9Y252 685 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 RPH3AQ9Y2J0 694 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-219ENST00000553488 ANK2Q01484 3957 aa6.83□□□□□ -1.32
ATXN3-219ENST00000553488 TMEM200CA6NKL6 621 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 FAM90A27PA6NNH2 459 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 ARHGEF33A8MVX0 844 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 H0YIG0 161 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 MYO1CO00159 1063 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 HAT1O14929 419 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 CLEC3AO75596 197 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 SLC25A12O75746 678 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 ZNF189O75820 626 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-219ENST00000553488 MATN4O95460 622 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 NSA2O95478 260 aaKnown RBP6.82□□□□□ -1.32
ATXN3-219ENST00000553488 HOXD4P09016 255 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-219ENST00000553488 EZRP15311 586 aaKnown RBP6.82□□□□□ -1.32
ATXN3-219ENST00000553488 RPS3P23396 243 aaKnown RBP eCLIP6.82□□□□□ -1.32
ATXN3-219ENST00000553488 CTNNA2P26232 953 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 CHRNB4P30926 498 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 GRIA1P42261 906 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 TPM4P67936 248 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 RHAGQ02094 409 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 RELAQ04206 551 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 FOLH1Q04609 750 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 CDH17Q12864 832 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 EXT1Q16394 746 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 P3H1Q32P28 736 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 MINDY4Q4G0A6 757 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 EMC4Q5J8M3 183 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 CTSL3PQ5NE16 218 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 ICE2Q659A1 982 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 SLC25A25Q6KCM7 469 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 CAVIN1Q6NZI2 390 aaKnown RBP6.82□□□□□ -1.32
ATXN3-219ENST00000553488 PAPD4Q6PIY7 484 aaKnown RBP6.82□□□□□ -1.32
ATXN3-219ENST00000553488 SUSD1Q6UWL2 747 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 VN1R4Q7Z5H5 301 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 PCGF5Q86SE9 256 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 EID3Q8N140 333 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 RAB42Q8N4Z0 105 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 FAM71DQ8N9W8 422 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 FAM98AQ8NCA5 519 aaKnown RBP6.82□□□□□ -1.32
ATXN3-219ENST00000553488 OR9A4Q8NGU2 314 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 LILRB4Q8NHJ6 448 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 ASB5Q8WWX0 329 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 METTL21AQ8WXB1 218 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 ALG3Q92685 438 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms