RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 BANPQ8N9N5 519 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 ZNF740Q8NDX6 193 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 OR51Q1Q8NH59 317 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 STT3BQ8TCJ2 826 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 ZNF483Q8TF39 744 aaPredicted RBP9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 TM9SF4Q92544 642 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 TBC1D20Q96BZ9 403 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 C10orf90Q96M02 699 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 CRB3Q9BUF7 120 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 CENPHQ9H3R5 247 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 VIPAS39Q9H9C1 493 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 WDR41Q9HAD4 459 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 LYRM4Q9HD34 91 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 PRDM9Q9NQV7 894 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 RIC8BQ9NVN3 520 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 OXSMQ9NWU1 459 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 TMEM216Q9P0N5 145 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 PHF11Q9UIL8 331 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 ADAM29Q9UKF5 820 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 MMACHCQ9Y4U1 282 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 ADAMTS20P59510 1910 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 FRYQ5TBA9 3013 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 ASPMQ8IZT6 3477 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 A0A0A6YYC8 382 aaPredicted RBP9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 A0A1W2PPM1 405 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 ARHGAP10A1A4S6 786 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 I3L1I5 382 aaPredicted RBP9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 AGPSO00116 658 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 BIRC5O15392 142 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 ERI3O43414 337 aaKnown RBP9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 HCRTR1O43613 425 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 DLX3O60479 287 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 KLF7O75840 302 aaPredicted RBP9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 ESRRBO95718 433 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 PROCP04070 461 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 ACPPP15309 386 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 GRK2P25098 689 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 HMOX2P30519 316 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 BUD31P41223 144 aaPredicted RBP9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 OR1D4P47884 311 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 ZNF844Q08AG5 666 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 CSTF3Q12996 717 aaKnown RBP9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 AIMP2Q13155 320 aaKnown RBP9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 ERV3-1Q14264 604 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 CPSF6Q16630 551 aaKnown RBP eCLIP9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 COL28A1Q2UY09 1125 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 DEPDC1Q5TB30 811 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 KHDRBS2Q5VWX1 349 aaKnown RBP9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 C16orf46Q6P387 395 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 FAM199XQ6PEV8 388 aaPredicted RBP9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 RIPOR1Q6ZS17 1223 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 PLD3Q8IV08 490 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.73□□□□□ -0.852e-7■■■■■ 102.3
TRAFD1-208ENST00000552890 ZNF595Q8IYB9 648 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 ARHGEF39Q8N4T4 335 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 ANKRD53Q8N9V6 530 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 PPP1R14CQ8TAE6 165 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 METTL6Q8TCB7 284 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 UTP15Q8TED0 518 aaKnown RBP9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 CREB3L4Q8TEY5 395 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 ZNF473Q8WTR7 871 aaKnown RBP9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 CPNE5Q9HCH3 593 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 ATP13A2Q9NQ11 1180 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 ACSS2Q9NR19 701 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 STARD5Q9NSY2 213 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 ZNF358Q9NW07 568 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 LYARQ9NX58 379 aaKnown RBP9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 NKIRAS1Q9NYS0 192 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 IL17BQ9UHF5 180 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 TEKT2Q9UIF3 430 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 C3orf18Q9UK00 162 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 PSME2Q9UL46 239 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 WBP11Q9Y2W2 641 aaKnown RBP9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 NAALAD2Q9Y3Q0 740 aa9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 DSPP15924 2871 aaKnown RBP9.73□□□□□ -0.85
TRAFD1-208ENST00000552890 CDC14CA4D256 554 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 IDSB3KWA1 339 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 FOXS1O43638 330 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 NPHS1O60500 1241 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 PRMT3O60678 531 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 SCELO95171 688 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 SIX3O95343 332 aaPredicted RBP9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 BMP10O95393 424 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 CAPN1P07384 714 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 FHP07954 510 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 ZNF888P0CJ79 500 aaPredicted RBP9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 SMIM10L1P0DMW3 83 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 NEFHP12036 1026 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 SSR2P43308 183 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 XCR1P46094 333 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 HSD17B7P56937 341 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 YBX1P67809 324 aaKnown RBP9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 SERTAD2Q14140 314 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 ZRSR2Q15696 482 aaKnown RBP9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 DEFB134Q4QY38 66 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 TOR1AIP1Q5JTV8 583 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 UBAP2Q5T6F2 1119 aaKnown RBP9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 MFSD4BQ5TF39 518 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 PRAMEF17Q5VTA0 474 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 JMJD6Q6NYC1 403 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms