RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 OTULINQ96BN8 352 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ERP27Q96DN0 273 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 SGF29Q96ES7 293 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 PERPQ96FX8 193 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ZC3HAV1LQ96H79 300 aaKnown RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 NAF1Q96HR8 494 aaKnown RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 BTN2A3PQ96KV6 586 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 CMTM3Q96MX0 182 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 BBS4Q96RK4 519 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 SIGLEC11Q96RL6 698 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 AGAP2Q99490 1192 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 MED10Q9BTT4 135 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 MAK16Q9BXY0 300 aaKnown RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 SLC17A9Q9BYT1 436 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 NUF2Q9BZD4 464 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 TRIM4Q9C037 500 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ZSCAN16Q9H4T2 348 aaPredicted RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 AAMDCQ9H7C9 122 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 AKIRIN1Q9H9L7 192 aaPredicted RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 THSD1Q9NS62 852 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 SLC6A13Q9NSD5 602 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 NKIRAS2Q9NYR9 191 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 TMEM9Q9P0T7 183 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 KLHL13Q9P2N7 655 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 CTNNAL1Q9UBT7 734 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 LSM7Q9UK45 103 aaKnown RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 PILRAQ9UKJ1 303 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 MKLN1Q9UL63 735 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ITM2BQ9Y287 266 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 AAR2Q9Y312 384 aaKnown RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 MED13Q9UHV7 2174 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 SHANK1Q9Y566 2161 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ANKHD1Q8IWZ3 2542 aaKnown RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ACANP16112 2415 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 SDK2Q58EX2 2172 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 CHD5Q8TDI0 1954 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 SCN8AQ9UQD0 1980 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 TRBV5-3A0A0A0MS03 114 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 IGHV5-10-1A0A0J9YXX1 117 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 LOC101059948A0A1B0GTJ6 334 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 A0A1B0GVL5 298 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 ILVBLA1L0T0 632 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 TRIM49BA6NDI0 452 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 TMEM202A6NGA9 273 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 FAM47DPA6NHR8 397 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 CBY3A6NI87 242 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 KRTAP9-7A8MTY7 169 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 H3BMH7 237 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 EBAG9O00559 213 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 HSPB6O14558 160 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 P4HA2O15460 535 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 INSIG1O15503 277 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 SEC14L5O43304 696 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 AQP9O43315 295 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 LIASO43766 372 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 DUX1O43812 170 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 SLC28A2O43868 658 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 NDUFS3O75489 264 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 CLDN11O75508 207 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 SEC31AO94979 1220 aaKnown RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 TNFSF15O95150 251 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 IPO7O95373 1038 aaKnown RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 MLYCDO95822 493 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 MT-CYBP00156 380 aaPredicted RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 CAPN1P07384 714 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 MYZAPP0CAP1 466 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 THRAP10827 490 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 LIPCP11150 499 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 PORP16435 677 aaPredicted RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 CHRNB2P17787 502 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 CTPS1P17812 591 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 POLR2EP19388 210 aaKnown RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 NR2F2P24468 414 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 OAS2P29728 719 aaKnown RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 CDAP32320 146 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 RYKP34925 604 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 UGT1A3P35503 534 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 HADHAP40939 763 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 UQCRFS1P47985 274 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 PSMD8P48556 350 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 FMO5P49326 533 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 CENPAP49450 140 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 NUMBP49757 651 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 SERPINH1P50454 418 aaKnown RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 MXI1P50539 228 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 PEX5P50542 639 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 CDH4P55283 916 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 HDAC4P56524 1084 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 GSCP56915 257 aaPredicted RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 COL10A1Q03692 680 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 CEBPZQ03701 1054 aaKnown RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 SLC18A2Q05940 514 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 NIPAL4Q0D2K0 466 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 EPS8Q12929 822 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 AIMP2Q13155 320 aaKnown RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 OLIG2Q13516 323 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 FGFBP1Q14512 234 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 DAZAP2Q15038 168 aaPredicted RBP2.29□□□□□ -2.04
CPSF6-207ENST00000551516 CYTH1Q15438 398 aa2.29□□□□□ -2.04
CPSF6-207ENST00000551516 SMTNL2Q2TAL5 461 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms