RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	ARHGEF39	Q8N4T4	335 aa		5.44	□□□□□ -1.54
RACGAP1-223	ENST00000551260	PSD4	Q8NDX1	1056 aa		5.44	□□□□□ -1.54
RACGAP1-223	ENST00000551260	ENOX1	Q8TC92	643 aa	Known RBP	5.44	□□□□□ -1.54
RACGAP1-223	ENST00000551260	SREK1	Q8WXA9	508 aa	Known RBP	5.44	□□□□□ -1.54
RACGAP1-223	ENST00000551260	SARAF	Q96BY9	339 aa		5.44	□□□□□ -1.54
RACGAP1-223	ENST00000551260	MARK4	Q96L34	752 aa		5.44	□□□□□ -1.54
RACGAP1-223	ENST00000551260	GSDMA	Q96QA5	445 aa		5.44	□□□□□ -1.54
RACGAP1-223	ENST00000551260	SLCO5A1	Q9H2Y9	848 aa		5.44	□□□□□ -1.54
RACGAP1-223	ENST00000551260	CXorf56	Q9H5V9	222 aa		5.44	□□□□□ -1.54
RACGAP1-223	ENST00000551260	CHODL	Q9H9P2	273 aa		5.44	□□□□□ -1.54
RACGAP1-223	ENST00000551260	LIN28A	Q9H9Z2	209 aa	Known RBP	5.44	□□□□□ -1.54
RACGAP1-223	ENST00000551260	PCDH18	Q9HCL0	1135 aa		5.44	□□□□□ -1.54
RACGAP1-223	ENST00000551260	MBNL3	Q9NUK0	354 aa	Known RBP	5.44	□□□□□ -1.54
RACGAP1-223	ENST00000551260	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	5.44	□□□□□ -1.54
RACGAP1-223	ENST00000551260	INTS7	Q9NVH2	962 aa	Known RBP	5.44	□□□□□ -1.54
RACGAP1-223	ENST00000551260	SMOX	Q9NWM0	555 aa		5.44	□□□□□ -1.54
RACGAP1-223	ENST00000551260	HCN3	Q9P1Z3	774 aa		5.44	□□□□□ -1.54
RACGAP1-223	ENST00000551260	C19orf25	Q9UFG5	118 aa	Predicted RBP	5.44	□□□□□ -1.54
RACGAP1-223	ENST00000551260	CAPN6	Q9Y6Q1	641 aa		5.44	□□□□□ -1.54
RACGAP1-223	ENST00000551260	FAM169A	Q9Y6X4	670 aa		5.44	□□□□□ -1.54
RACGAP1-223	ENST00000551260	IGHV4-30-2	A0A087WSY4	118 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	TRGV5	A0A0B4J1U4	118 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	FCHO1	O14526	889 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	UBFD1	O14562	309 aa	Known RBP	5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	P2RX6	O15547	441 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	PRPF4	O43172	522 aa	Known RBP eCLIP	5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	TCF21	O43680	179 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	SUSD5	O60279	629 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	LMX1B	O60663	402 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	DNAJA2	O60884	412 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	ITGA10	O75578	1167 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	CDC123	O75794	336 aa	Predicted RBP	5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	NDST3	O95803	873 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	EPPIN	O95925	133 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	IGHV4-39	P01824	125 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	TUBB4A	P04350	444 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	RNASE1	P07998	156 aa	Known RBP	5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	CD48	P09326	243 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	ATP1B2	P14415	290 aa	Predicted RBP	5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	CCNC	P24863	283 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	CTSS	P25774	331 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	SERPINB6	P35237	376 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	IDUA	P35475	653 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	PCK1	P35558	622 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	TIMP3	P35625	211 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	CDKN1A	P38936	164 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	XCR1	P46094	333 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	DNASE1L1	P49184	302 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	CDKN1C	P49918	316 aa	Predicted RBP	5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	CLCN7	P51798	805 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	FOXF2	Q12947	444 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	PKP1	Q13835	747 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	MPP2	Q14168	576 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	GRB7	Q14451	532 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	NCBP2-AS2	Q69YL0	99 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	DNM1P46	Q6ZS02	220 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	RNF44	Q7L0R7	432 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	MFSD4A	Q8N468	514 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	SLC25A41	Q8N5S1	370 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	TMEM156	Q8N614	296 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	CLDN19	Q8N6F1	224 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	CSNK1A1L	Q8N752	337 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	OR9A4	Q8NGU2	314 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	OR5K2	Q8NHB8	316 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	DTX3L	Q8TDB6	740 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	BLOC1S5	Q8TDH9	187 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	SMARCE1	Q969G3	411 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	IMP4	Q96G21	291 aa	Known RBP	5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	DCUN1D1	Q96GG9	259 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	ZC3HAV1L	Q96H79	300 aa	Known RBP	5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	LPAR4	Q99677	370 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	ANGPTL4	Q9BY76	406 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	SLC6A15	Q9H2J7	730 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	SEMA4B	Q9NPR2	832 aa	Predicted RBP	5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	LUC7L	Q9NQ29	371 aa	Known RBP	5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	PSD3	Q9NYI0	1048 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	AMACR	Q9UHK6	382 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	POLG2	Q9UHN1	485 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	MAN1B1	Q9UKM7	699 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	LAMP3	Q9UQV4	416 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	PCDHA3	Q9Y5H8	950 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	NFS1	Q9Y697	457 aa		5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260	EPPK1	P58107	5090 aa	Known RBP	5.43	□□□□□ -1.54
RACGAP1-223	ENST00000551260		A8MUA0	341 aa		5.42	□□□□□ -1.54
RACGAP1-223	ENST00000551260	TARM1	B6A8C7	271 aa		5.42	□□□□□ -1.54
RACGAP1-223	ENST00000551260	CCL22	O00626	93 aa		5.42	□□□□□ -1.54
RACGAP1-223	ENST00000551260	RNF8	O76064	485 aa		5.42	□□□□□ -1.54
RACGAP1-223	ENST00000551260	SRP72	O76094	671 aa	Known RBP	5.42	□□□□□ -1.54
RACGAP1-223	ENST00000551260	VENTX	O95231	258 aa		5.42	□□□□□ -1.54
RACGAP1-223	ENST00000551260	HTR3B	O95264	441 aa		5.42	□□□□□ -1.54
RACGAP1-223	ENST00000551260	AP2A1	O95782	977 aa		5.42	□□□□□ -1.54
RACGAP1-223	ENST00000551260	PRSS56	P0CW18	603 aa		5.42	□□□□□ -1.54
RACGAP1-223	ENST00000551260	ZSCAN22	P10073	491 aa	Predicted RBP	5.42	□□□□□ -1.54
RACGAP1-223	ENST00000551260	UCHL3	P15374	230 aa		5.42	□□□□□ -1.54
RACGAP1-223	ENST00000551260	CD9	P21926	228 aa		5.42	□□□□□ -1.54
RACGAP1-223	ENST00000551260	CRYGS	P22914	178 aa		5.42	□□□□□ -1.54
RACGAP1-223	ENST00000551260	CPOX	P36551	454 aa		5.42	□□□□□ -1.54
RACGAP1-223	ENST00000551260	MC3R	P41968	323 aa		5.42	□□□□□ -1.54
RACGAP1-223	ENST00000551260	CPA2	P48052	419 aa		5.42	□□□□□ -1.54

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