RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 MINDY4Q4G0A6 757 aa13□□□□□ -0.33
TROAP-213ENST00000550709 UNC50Q53HI1 259 aa13□□□□□ -0.33
TROAP-213ENST00000550709 SGO1Q5FBB7 561 aa13□□□□□ -0.33
TROAP-213ENST00000550709 LIPJQ5W064 366 aa13□□□□□ -0.33
TROAP-213ENST00000550709 TRABD2AQ86V40 505 aa13□□□□□ -0.33
TROAP-213ENST00000550709 LAS2Q8IYD9 372 aa13□□□□□ -0.33
TROAP-213ENST00000550709 CCNYL1Q8N7R7 359 aa13□□□□□ -0.33
TROAP-213ENST00000550709 EXD3Q8N9H8 876 aa13□□□□□ -0.33
TROAP-213ENST00000550709 HUS1BQ8NHY5 278 aa13□□□□□ -0.33
TROAP-213ENST00000550709 TRPC4APQ8TEL6 797 aa13□□□□□ -0.33
TROAP-213ENST00000550709 ZNF483Q8TF39 744 aaPredicted RBP13□□□□□ -0.33
TROAP-213ENST00000550709 ZNF473Q8WTR7 871 aaKnown RBP13□□□□□ -0.33
TROAP-213ENST00000550709 MTFMTQ96DP5 389 aaKnown RBP13□□□□□ -0.33
TROAP-213ENST00000550709 MS4A6EQ96DS6 147 aa13□□□□□ -0.33
TROAP-213ENST00000550709 PEX11GQ96HA9 241 aa13□□□□□ -0.33
TROAP-213ENST00000550709 TMEM237Q96Q45 408 aa13□□□□□ -0.33
TROAP-213ENST00000550709 MTERF1Q99551 399 aaKnown RBP13□□□□□ -0.33
TROAP-213ENST00000550709 TMEM109Q9BVC6 243 aa13□□□□□ -0.33
TROAP-213ENST00000550709 ERVK-6Q9BXR3 956 aa13□□□□□ -0.33
TROAP-213ENST00000550709 TRIM55Q9BYV6 548 aa13□□□□□ -0.33
TROAP-213ENST00000550709 REXO4Q9GZR2 422 aaKnown RBP13□□□□□ -0.33
TROAP-213ENST00000550709 IQCGQ9H095 443 aaKnown RBP13□□□□□ -0.33
TROAP-213ENST00000550709 CENPHQ9H3R5 247 aa13□□□□□ -0.33
TROAP-213ENST00000550709 C14orf105Q9NVL8 296 aa13□□□□□ -0.33
TROAP-213ENST00000550709 P4HTMQ9NXG6 502 aa13□□□□□ -0.33
TROAP-213ENST00000550709 MKL2Q9ULH7 1088 aa13□□□□□ -0.33
TROAP-213ENST00000550709 CHD6Q8TD26 2715 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 A6NL46 340 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 IDSB3KWA1 339 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 G3V2L1 256 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 ATXN7O15265 892 aaPredicted RBP12.99□□□□□ -0.33
TROAP-213ENST00000550709 ALOX12BO75342 701 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 CDC123O75794 336 aaPredicted RBP12.99□□□□□ -0.33
TROAP-213ENST00000550709 TBX6O95947 436 aaPredicted RBP12.99□□□□□ -0.33
TROAP-213ENST00000550709 SMIM10L1P0DMW3 83 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 PRKAA2P54646 552 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 TRAF3Q13114 568 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 E2F2Q14209 437 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 CCDC153Q494R4 210 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 SOWAHCQ53LP3 525 aaPredicted RBP12.99□□□□□ -0.33
TROAP-213ENST00000550709 ZNF678Q5SXM1 525 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 CEP85LQ5SZL2 805 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 FAM219BQ5XKK7 198 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 TTC19Q6DKK2 380 aaPredicted RBP12.99□□□□□ -0.33
TROAP-213ENST00000550709 ZYG11AQ6WRX3 759 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 MILR1Q7Z6M3 343 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 SLC22A9Q8IVM8 553 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 L3MBTL4Q8NA19 623 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 GAL3ST3Q96A11 431 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 C8orf44Q96CB5 159 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 SMIM10Q96HG1 83 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 SEC16BQ96JE7 1060 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 ZIM3Q96PE6 472 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 TGIF2Q9GZN2 237 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 ING2Q9H160 280 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 OR51B5Q9H339 312 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 SEMA3GQ9NS98 782 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 FBXL4Q9UKA2 621 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 PCDHGA11Q9Y5H2 935 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 HS3ST3B1Q9Y662 390 aa12.99□□□□□ -0.33
TROAP-213ENST00000550709 FAM208BQ5VWN6 2430 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 A0A1B0GTL3 188 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 FAM227AF5H4B4 570 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 H0YIV9 168 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 RTCAO00442 366 aaKnown RBP12.98□□□□□ -0.33
TROAP-213ENST00000550709 SOCS6O14544 535 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 RGS16O15492 202 aaPredicted RBP12.98□□□□□ -0.33
TROAP-213ENST00000550709 UGDHO60701 494 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 B4GALT2O60909 372 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 OTCP00480 354 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 IGHEP01854 428 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 CPA3P15088 417 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 CREB1P16220 341 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 IMPDH1P20839 514 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 RPS13P62277 151 aaKnown RBP12.98□□□□□ -0.33
TROAP-213ENST00000550709 CLCQ05315 142 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 TGM3Q08188 693 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 KCNAB2Q13303 367 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 RAPSNQ13702 412 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 LETMD1Q6P1Q0 360 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 TRIM40Q6P9F5 258 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 ABHD17CQ6PCB6 329 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 KIRREL2Q6UWL6 708 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 CHSY3Q70JA7 882 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 IQCKQ8N0W5 287 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 BANPQ8N9N5 519 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 ARMC2Q8NEN0 867 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 OR2L5Q8NG80 312 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 OR4F6Q8NGB9 312 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 SLC39A7Q92504 469 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 TBC1D20Q96BZ9 403 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 CMTM7Q96FZ5 175 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 APOPT1Q96IL0 206 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 IP6K3Q96PC2 410 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 SMC6Q96SB8 1091 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 NTMT1Q9BV86 223 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 MS4A8Q9BY19 250 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 SEMA4CQ9C0C4 833 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 VN1R1Q9GZP7 353 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 COPS7BQ9H9Q2 264 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms