RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 NAGSQ8N159 534 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 RNF175Q8N4F7 328 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 SPPL2AQ8TCT8 520 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 GIPC3Q8TF64 312 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 RORBQ92753 470 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 RGMAQ96B86 450 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 ZBED6CLQ96FA7 236 aaPredicted RBP8.57□□□□□ -1.04
TMEM116-209ENST00000550020 FAIM2Q9BWQ8 316 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 OR51B5Q9H339 312 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 SOX17Q9H6I2 414 aaPredicted RBP8.57□□□□□ -1.04
TMEM116-209ENST00000550020 MVB12BQ9H7P6 319 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 GPN2Q9H9Y4 310 aaPredicted RBP8.57□□□□□ -1.04
TMEM116-209ENST00000550020 PALMDQ9NP74 551 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 WARS2Q9UGM6 360 aaKnown RBP8.57□□□□□ -1.04
TMEM116-209ENST00000550020 TMEFF2Q9UIK5 374 aaPredicted RBP8.57□□□□□ -1.04
TMEM116-209ENST00000550020 PSME2Q9UL46 239 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 SCML1Q9UN30 329 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 ABCG2Q9UNQ0 655 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 POFUT2Q9Y2G5 429 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 NAALAD2Q9Y3Q0 740 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 HEBP2Q9Y5Z4 205 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 STON1Q9Y6Q2 735 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 U3KQV3 271 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 NUP210Q8TEM1 1887 aaPredicted RBP8.57□□□□□ -1.04
TMEM116-209ENST00000550020 SRCAPQ6ZRS2 3230 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 KRT87PA6NCN2 255 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 ARRDC5A6NEK1 342 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 IGLON5A6NGN9 336 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 TRIM64BA6NI03 449 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 ZNF99A8MXY4 864 aaPredicted RBP8.56□□□□□ -1.04
TMEM116-209ENST00000550020 H3BMQ9 156 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 TNFRSF11BO00300 401 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 PDPK1O15530 556 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 RGS10O43665 173 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 MPZL2O60487 215 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 TNFRSF21O75509 655 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 CLEC3AO75596 197 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 BCL10O95999 233 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 CA3P07451 260 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 IL3P08700 152 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 PRKACGP22612 351 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 RRM2P31350 389 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 GJA4P35212 333 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 SOAT1P35610 550 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 OPRD1P41143 372 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 SERPINB10P48595 397 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 DSTNP60981 165 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 HBA1P69905 142 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 KCNJ10P78508 379 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 HPCAP84074 193 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 IL1RL1Q01638 556 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 KCNC4Q03721 635 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 TGM3Q08188 693 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 CDK5R2Q13319 367 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 GAB1Q13480 694 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 ENPP2Q13822 863 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 MEP1AQ16819 746 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 SPDYE7PQ495Y7 208 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 PPP2R2DQ66LE6 453 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 REEP3Q6NUK4 255 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 BHLHB9Q6PI77 547 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.56□□□□□ -1.04
TMEM116-209ENST00000550020 ZNF551Q7Z340 670 aaPredicted RBP8.56□□□□□ -1.04
TMEM116-209ENST00000550020 ARHGAP22Q7Z5H3 698 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 ADGRD2Q7Z7M1 963 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 P3H2Q8IVL5 708 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 CHPFQ8IZ52 775 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 C10orf111Q8N326 155 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 C12orf76Q8N812 135 aaPredicted RBP8.56□□□□□ -1.04
TMEM116-209ENST00000550020 SRFBP1Q8NEF9 429 aaKnown RBP8.56□□□□□ -1.04
TMEM116-209ENST00000550020 OR4K1Q8NGD4 311 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 OR5AR1Q8NGP9 310 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 MYDGFQ969H8 173 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 BORCS5Q969J3 196 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 MUL1Q969V5 352 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 ELSPBP1Q96BH3 223 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 ZFYVE19Q96K21 471 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 COG8Q96MW5 612 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 FERD3LQ96RJ6 166 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 PITX2Q99697 317 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 PSD2Q9BQI7 771 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 SPATA5L1Q9BVQ7 753 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 MS4A8Q9BY19 250 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 GABARAPL3Q9BY60 117 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 A4GALTQ9NPC4 353 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 ZDHHC4Q9NPG8 344 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 ACSS1Q9NUB1 689 aaPredicted RBP8.56□□□□□ -1.04
TMEM116-209ENST00000550020 TBC1D23Q9NUY8 699 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 EHD3Q9NZN3 535 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 EBF1Q9UH73 591 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 TAC3Q9UHF0 121 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 NDRG4Q9ULP0 352 aaKnown RBP8.56□□□□□ -1.04
TMEM116-209ENST00000550020 BTBD3Q9Y2F9 522 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 TMEM98Q9Y2Y6 226 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 MAGED1Q9Y5V3 778 aaPredicted RBP8.56□□□□□ -1.04
TMEM116-209ENST00000550020 PTPRSQ13332 1948 aa8.56□□□□□ -1.04
TMEM116-209ENST00000550020 TRBC2A0A5B9 178 aa8.55□□□□□ -1.04
TMEM116-209ENST00000550020 SLC22A1O15245 554 aa8.55□□□□□ -1.04
TMEM116-209ENST00000550020 NDUFS4O43181 175 aa8.55□□□□□ -1.04
TMEM116-209ENST00000550020 FAM20BO75063 409 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms