RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 GPR22Q99680 433 aa15.35■□□□□ 0.05
VPS29-207ENST00000549970 AICDAQ9GZX7 198 aa15.35■□□□□ 0.05
VPS29-207ENST00000549970 RHBGQ9H310 441 aa15.35■□□□□ 0.05
VPS29-207ENST00000549970 MMP25Q9NPA2 562 aa15.35■□□□□ 0.05
VPS29-207ENST00000549970 PSMD12O00232 456 aaPredicted RBP15.34■□□□□ 0.05
VPS29-207ENST00000549970 TAPBPO15533 448 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 MAN1A2O60476 641 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 PRMT3O60678 531 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 H2AFYO75367 372 aaKnown RBP15.34■□□□□ 0.05
VPS29-207ENST00000549970 RASAL1O95294 804 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 CLDN1O95832 211 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 SMIM10L1P0DMW3 83 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 MYBL2P10244 700 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 RNH1P13489 461 aaKnown RBP15.34■□□□□ 0.05
VPS29-207ENST00000549970 CD1DP15813 335 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 COL8A1P27658 744 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 TDGF1P3P51864 188 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 KCNK10P57789 538 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 SLC26A5P58743 744 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 GPX6P59796 221 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 BTG2P78543 158 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 PMP22Q01453 160 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 OR4D1Q15615 310 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 MEP1AQ16819 746 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 H3F3CQ6NXT2 135 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 TMIGD1Q6UXZ0 262 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 SLCO4C1Q6ZQN7 724 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 MAMDC2Q7Z304 686 aaPredicted RBP15.34■□□□□ 0.05
VPS29-207ENST00000549970 GPSM1Q86YR5 675 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 KLHDC8AQ8IYD2 350 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 EXT2Q93063 718 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 ESAMQ96AP7 390 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 SMIM10Q96HG1 83 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 NPAS2Q99743 824 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 TMEM79Q9BSE2 394 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 RAB17Q9H0T7 212 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 ANKRD10Q9NXR5 420 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 ABI3Q9P2A4 366 aa15.34■□□□□ 0.05
VPS29-207ENST00000549970 A0A0G2JN53 185 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 FAM227AF5H4B4 570 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 C1QAP02745 245 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 GSTA2P09210 222 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 MAOAP21397 527 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 GMPRP36959 345 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 HSPA7P48741 367 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 TAS2R50P59544 299 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 RAB10P61026 200 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 ATP6V0D1P61421 351 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 STXBP1P61764 594 aaKnown RBP15.33■□□□□ 0.04
VPS29-207ENST00000549970 ETF1P62495 437 aaKnown RBP15.33■□□□□ 0.04
VPS29-207ENST00000549970 BTN3A2P78410 334 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 TUBA3CQ13748 450 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 TRADDQ15628 312 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 KBTBD12Q3ZCT8 623 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 ZNF766Q5HY98 468 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 TUBA3EQ6PEY2 450 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 GFRALQ6UXV0 394 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 QSOX2Q6ZRP7 698 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 CYS1Q717R9 158 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 KRT78Q8N1N4 520 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 CA13Q8N1Q1 262 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 TCAIMQ8N3R3 496 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 KIF2BQ8N4N8 673 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 SLC5A8Q8N695 610 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 PPM1NQ8N819 430 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 SNX31Q8N9S9 440 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 TTLQ8NG68 377 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 FBXO25Q8TCJ0 367 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 FAR2Q96K12 515 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 SIGLEC12Q96PQ1 595 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 DNAJC11Q9NVH1 559 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 CD274Q9NZQ7 290 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 CROCCQ5TZA2 2017 aa15.33■□□□□ 0.04
VPS29-207ENST00000549970 A8MUA0 341 aa15.32■□□□□ 0.04
VPS29-207ENST00000549970 ERI3O43414 337 aaKnown RBP15.32■□□□□ 0.04
VPS29-207ENST00000549970 FAM155BO75949 473 aa15.32■□□□□ 0.04
VPS29-207ENST00000549970 CRYABP02511 175 aaKnown RBP15.32■□□□□ 0.04
VPS29-207ENST00000549970 HNRNPH1P31943 449 aaKnown RBP15.32■□□□□ 0.04
VPS29-207ENST00000549970 SPRP35270 261 aaPredicted RBP15.32■□□□□ 0.04
VPS29-207ENST00000549970 MAGEA4P43358 317 aa15.32■□□□□ 0.04
VPS29-207ENST00000549970 CAV1Q03135 178 aa15.32■□□□□ 0.04
VPS29-207ENST00000549970 SLMAPQ14BN4 828 aa15.32■□□□□ 0.04
VPS29-207ENST00000549970 OR1C1Q15619 314 aa15.32■□□□□ 0.04
VPS29-207ENST00000549970 ZKSCAN8Q15776 578 aaPredicted RBP15.32■□□□□ 0.04
VPS29-207ENST00000549970 GRTP1Q5TC63 336 aa15.32■□□□□ 0.04
VPS29-207ENST00000549970 C1QL3Q5VWW1 255 aa15.32■□□□□ 0.04
VPS29-207ENST00000549970 SULT1C3Q6IMI6 304 aa15.32■□□□□ 0.04
VPS29-207ENST00000549970 ZDHHC24Q6UX98 284 aa15.32■□□□□ 0.04
VPS29-207ENST00000549970 FJX1Q86VR8 437 aa15.32■□□□□ 0.04
VPS29-207ENST00000549970 FBF1Q8TES7 1133 aa15.32■□□□□ 0.04
VPS29-207ENST00000549970 GAL3ST3Q96A11 431 aa15.32■□□□□ 0.04
VPS29-207ENST00000549970 UTP23Q9BRU9 249 aaKnown RBP15.32■□□□□ 0.04
VPS29-207ENST00000549970 CAPS2Q9BXY5 557 aa15.32■□□□□ 0.04
VPS29-207ENST00000549970 HES7Q9BYE0 225 aa15.32■□□□□ 0.04
VPS29-207ENST00000549970 PHACTR1Q9C0D0 580 aa15.32■□□□□ 0.04
VPS29-207ENST00000549970 CNOT10Q9H9A5 744 aaKnown RBP15.32■□□□□ 0.04
VPS29-207ENST00000549970 CLK4Q9HAZ1 481 aaKnown RBP15.32■□□□□ 0.04
VPS29-207ENST00000549970 NECTIN3Q9NQS3 549 aa15.32■□□□□ 0.04
VPS29-207ENST00000549970 PRDM9Q9NQV7 894 aa15.32■□□□□ 0.04
VPS29-207ENST00000549970 KLHL1Q9NR64 748 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms