RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 CDKL2Q92772 493 aa18.37■□□□□ 0.53
SLC48A1-207ENST00000549243 SIGLEC12Q96PQ1 595 aa18.37■□□□□ 0.53
SLC48A1-207ENST00000549243 DERL2Q9GZP9 239 aa18.37■□□□□ 0.53
SLC48A1-207ENST00000549243 AICDAQ9GZX7 198 aa18.37■□□□□ 0.53
SLC48A1-207ENST00000549243 MMP25Q9NPA2 562 aa18.37■□□□□ 0.53
SLC48A1-207ENST00000549243 GRHL1Q9NZI5 618 aa18.37■□□□□ 0.53
SLC48A1-207ENST00000549243 TCRBV9S1A1TA0A576 114 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 FAM227AF5H4B4 570 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 PSMD12O00232 456 aaPredicted RBP18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 PRMT3O60678 531 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 H2AFYO75367 372 aaKnown RBP18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 WISP3O95389 354 aaPredicted RBP18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 SERPINA6P08185 405 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 C1GALT1C1LP0DN25 315 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 MYBL2P10244 700 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 MAOAP21397 527 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 MST1P26927 711 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 SLC26A5P58743 744 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 TUBA3CQ13748 450 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 SLBPQ14493 270 aaKnown RBP eCLIP18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 MEP1AQ16819 746 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 CRYBG3Q68DQ2 2970 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 TUBA3EQ6PEY2 450 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 GFRALQ6UXV0 394 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 SLCO4C1Q6ZQN7 724 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 CCDC25Q86WR0 208 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 CTAGE3PQ8IX95 158 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 ESAMQ96AP7 390 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 TSPAN17Q96FV3 270 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 RBBP8Q99708 897 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 TMEM79Q9BSE2 394 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 HES7Q9BYE0 225 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 KLHL1Q9NR64 748 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 WWOXQ9NZC7 414 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 ABI3Q9P2A4 366 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 ITPR2Q14571 2701 aa18.36■□□□□ 0.53
SLC48A1-207ENST00000549243 A8MUA0 341 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 EIF3HO15372 352 aaKnown RBP eCLIP18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 TAPBPO15533 448 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 ZG16O60844 167 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 UNC5CO95185 931 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 CRYABP02511 175 aaKnown RBP18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 SMIM10L1P0DMW3 83 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 RNH1P13489 461 aaKnown RBP18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 CASQ1P31415 396 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 GMPRP36959 345 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 CD96P40200 585 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 PLTPP55058 493 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 PER3P56645 1201 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 TAS2R50P59544 299 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 GPX6P59796 221 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 BTN3A2P78410 334 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 OR4D1Q15615 310 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 TMIGD1Q6UXZ0 262 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 C3orf62Q6ZUJ4 267 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 GPSM1Q86YR5 675 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 CA13Q8N1Q1 262 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 KIF2BQ8N4N8 673 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 SLC5A8Q8N695 610 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 EXT2Q93063 718 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 SMIM10Q96HG1 83 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 GPR22Q99680 433 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 CPNE1Q99829 537 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 UTP23Q9BRU9 249 aaKnown RBP18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 PCNX1Q96RV3 2341 aa18.35■□□□□ 0.53
SLC48A1-207ENST00000549243 FAM159BA6NKW6 160 aa18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 GABRR3A8MPY1 467 aa18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 STSP08842 583 aa18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 CD1DP15813 335 aa18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 STMN1P16949 149 aa18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 HNRNPH1P31943 449 aaKnown RBP18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 GP5P40197 560 aa18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 HSPA7P48741 367 aa18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 OC90Q02509 493 aaPredicted RBP18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 OR1C1Q15619 314 aa18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 TRADDQ15628 312 aa18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 SPINK14Q6IE38 97 aa18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 QSOX2Q6ZRP7 698 aa18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 KLHDC8AQ8IYD2 350 aa18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 SNX31Q8N9S9 440 aa18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 MDS2Q8NDY4 140 aa18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 DNAJB8Q8NHS0 232 aa18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 FAR2Q96K12 515 aa18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 CDCP1Q9H5V8 836 aa18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 NECTIN3Q9NQS3 549 aa18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 DNAJC11Q9NVH1 559 aa18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.34■□□□□ 0.53
SLC48A1-207ENST00000549243 ERI3O43414 337 aaKnown RBP18.33■□□□□ 0.52
SLC48A1-207ENST00000549243 FAM155BO75949 473 aa18.33■□□□□ 0.52
SLC48A1-207ENST00000549243 WISP2O76076 250 aa18.33■□□□□ 0.52
SLC48A1-207ENST00000549243 DCTP40126 519 aa18.33■□□□□ 0.52
SLC48A1-207ENST00000549243 STXBP1P61764 594 aaKnown RBP18.33■□□□□ 0.52
SLC48A1-207ENST00000549243 ILF2Q12905 390 aaKnown RBP18.33■□□□□ 0.52
SLC48A1-207ENST00000549243 SYT10Q6XYQ8 523 aa18.33■□□□□ 0.52
SLC48A1-207ENST00000549243 KRT78Q8N1N4 520 aa18.33■□□□□ 0.52
SLC48A1-207ENST00000549243 PPM1NQ8N819 430 aa18.33■□□□□ 0.52
SLC48A1-207ENST00000549243 ELP5Q8TE02 316 aa18.33■□□□□ 0.52
SLC48A1-207ENST00000549243 GAL3ST3Q96A11 431 aa18.33■□□□□ 0.52
SLC48A1-207ENST00000549243 CNOT10Q9H9A5 744 aaKnown RBP18.33■□□□□ 0.52
SLC48A1-207ENST00000549243 CLK4Q9HAZ1 481 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms