RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 JADE3Q92613 823 aa19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 ACTR8Q9H981 624 aa19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 TMEM9Q9P0T7 183 aa19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 RNF11Q9Y3C5 154 aa19.11■□□□□ 0.65
CTDSP2-204ENST00000548823 IGHV1OR21-1A0A087WYE8 117 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 FKBP6O75344 327 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 POP7O75817 140 aaKnown RBP19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 STK17BO94768 372 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 PSMG1O95456 288 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 PRPH2P23942 346 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 CSF2RBP32927 897 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 GCKP35557 465 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 STAT5AP42229 794 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 PREPP48147 710 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 ABRAXAS2Q15018 415 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 PIGGQ5H8A4 983 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 TCHHL1Q5QJ38 904 aaPredicted RBP19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 C1orf146Q5VVC0 180 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 LIPJQ5W064 366 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 FAM219BQ5XKK7 198 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 C8orf82Q6P1X6 216 aaPredicted RBP19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 UNC5DQ6UXZ4 953 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 RIPOR1Q6ZS17 1223 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 C11orf96Q7Z7L8 435 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 TRIM74Q86UV6 250 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 CFAP206Q8IYR0 622 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 SNX31Q8N9S9 440 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 STMN2Q93045 179 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 CTRCQ99895 268 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 STOX2Q9P2F5 926 aaPredicted RBP19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 PDP2Q9P2J9 529 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 GIMAP2Q9UG22 337 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 SNX6Q9UNH7 406 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 POLHQ9Y253 713 aa19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 MRPS18BQ9Y676 258 aaKnown RBP19.1■□□□□ 0.65
CTDSP2-204ENST00000548823 IFRD1O00458 451 aaPredicted RBP19.09■□□□□ 0.65
CTDSP2-204ENST00000548823 MRASO14807 208 aa19.09■□□□□ 0.65
CTDSP2-204ENST00000548823 C1orf105O95561 183 aa19.09■□□□□ 0.65
CTDSP2-204ENST00000548823 E2F2Q14209 437 aa19.09■□□□□ 0.65
CTDSP2-204ENST00000548823 EIF2S3LQ2VIR3 472 aaKnown RBP19.09■□□□□ 0.65
CTDSP2-204ENST00000548823 AGTRAPQ6RW13 159 aa19.09■□□□□ 0.65
CTDSP2-204ENST00000548823 NRROSQ86YC3 692 aa19.09■□□□□ 0.65
CTDSP2-204ENST00000548823 MYLK4Q86YV6 388 aaPredicted RBP19.09■□□□□ 0.65
CTDSP2-204ENST00000548823 LILRA3Q8N6C8 439 aaPredicted RBP19.09■□□□□ 0.65
CTDSP2-204ENST00000548823 NPAS2Q99743 824 aa19.09■□□□□ 0.65
CTDSP2-204ENST00000548823 GSDMCQ9BYG8 508 aa19.09■□□□□ 0.65
CTDSP2-204ENST00000548823 SLC52A3Q9NQ40 469 aa19.09■□□□□ 0.65
CTDSP2-204ENST00000548823 FBXO8Q9NRD0 319 aa19.09■□□□□ 0.65
CTDSP2-204ENST00000548823 GPRC5BQ9NZH0 403 aa19.09■□□□□ 0.65
CTDSP2-204ENST00000548823 NOP53Q9NZM5 478 aaKnown RBP19.09■□□□□ 0.65
CTDSP2-204ENST00000548823 BCAP29Q9UHQ4 241 aa19.09■□□□□ 0.65
CTDSP2-204ENST00000548823 MOSPD1Q9UJG1 213 aa19.09■□□□□ 0.65
CTDSP2-204ENST00000548823 POMPQ9Y244 141 aa19.09■□□□□ 0.65
CTDSP2-204ENST00000548823 OTOGQ6ZRI0 2925 aa19.09■□□□□ 0.65
CTDSP2-204ENST00000548823 PRSS38A1L453 326 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 PPM1DO15297 605 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 PDGFAP04085 211 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 ACADLP28330 430 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 PDHA2P29803 388 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 PBLDP30039 288 aaPredicted RBP19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 DIO3P55073 304 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 PSME3P61289 254 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 RCAN2Q14206 197 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 MAP7Q14244 749 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 NR6A1Q15406 480 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 SPATS1Q496A3 300 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 PRMT9Q6P2P2 845 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 SCIMPQ6UWF3 145 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 LRRTM4Q86VH4 590 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 ESX1Q8N693 406 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 FNDC5Q8NAU1 212 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 OR9I1Q8NGQ6 314 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 CDRT15Q96T59 188 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 PKP4Q99569 1192 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 RMI1Q9H9A7 625 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 PHPT1Q9NRX4 125 aaPredicted RBP19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 TAAR2Q9P1P5 351 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 STX18Q9P2W9 335 aaKnown RBP19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 ZNF490Q9ULM2 529 aaPredicted RBP19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 SLC22A14Q9Y267 594 aa19.08■□□□□ 0.65
CTDSP2-204ENST00000548823 FAM234BA2RU67 622 aa19.07■□□□□ 0.64
CTDSP2-204ENST00000548823 KMOO15229 486 aa19.07■□□□□ 0.64
CTDSP2-204ENST00000548823 KCNJ13O60928 360 aa19.07■□□□□ 0.64
CTDSP2-204ENST00000548823 SLC22A3O75751 556 aa19.07■□□□□ 0.64
CTDSP2-204ENST00000548823 DLGAP3O95886 979 aa19.07■□□□□ 0.64
CTDSP2-204ENST00000548823 ACPPP15309 386 aa19.07■□□□□ 0.64
CTDSP2-204ENST00000548823 F8A1P23610 371 aa19.07■□□□□ 0.64
CTDSP2-204ENST00000548823 IMPA1P29218 277 aa19.07■□□□□ 0.64
CTDSP2-204ENST00000548823 CASP2P42575 452 aa19.07■□□□□ 0.64
CTDSP2-204ENST00000548823 GNPDA1P46926 289 aa19.07■□□□□ 0.64
CTDSP2-204ENST00000548823 GPLD1P80108 840 aa19.07■□□□□ 0.64
CTDSP2-204ENST00000548823 FOXM1Q08050 763 aa19.07■□□□□ 0.64
CTDSP2-204ENST00000548823 ILF3Q12906 894 aaKnown RBP eCLIP19.07■□□□□ 0.64
CTDSP2-204ENST00000548823 AP5B1Q2VPB7 878 aa19.07■□□□□ 0.64
CTDSP2-204ENST00000548823 AMZ2Q86W34 360 aa19.07■□□□□ 0.64
CTDSP2-204ENST00000548823 THOC6Q86W42 341 aaKnown RBP19.07■□□□□ 0.64
CTDSP2-204ENST00000548823 HOPXQ9BPY8 73 aaPredicted RBP19.07■□□□□ 0.64
CTDSP2-204ENST00000548823 LGR4Q9BXB1 951 aa19.07■□□□□ 0.64
CTDSP2-204ENST00000548823 OR52A5Q9H2C5 316 aa19.07■□□□□ 0.64
CTDSP2-204ENST00000548823 CROTQ9UKG9 612 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms