RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 TIMM29Q9BSF4 260 aa16.56■□□□□ 0.24
RBFOX1-207ENST00000547338 C1orf50Q9BV19 199 aa16.56■□□□□ 0.24
RBFOX1-207ENST00000547338 DPY30Q9C005 99 aa16.56■□□□□ 0.24
RBFOX1-207ENST00000547338 AHCTF1Q8WYP5 2266 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 ASPDHA6ND91 283 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 KMOO15229 486 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 KIF1CO43896 1103 aaKnown RBP16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 PRMT3O60678 531 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 GMNNO75496 209 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 HOXB3P14651 431 aaPredicted RBP16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 IL12AP29459 219 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 ALDH4A1P30038 563 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 EIF2S3P41091 472 aaKnown RBP16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 GPR3P46089 330 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 UBE2IP63279 158 aaKnown RBP16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 HSPA14Q0VDF9 509 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 KIAA0040Q15053 153 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 C18orf21Q32NC0 220 aaPredicted RBP16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 AMZ1Q400G9 498 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 RFTN2Q52LD8 501 aaPredicted RBP16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 DLEU7Q6UYE1 221 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 USP53Q70EK8 1073 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 VPS33AQ96AX1 596 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 CMTM7Q96FZ5 175 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 CRELD1Q96HD1 420 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 CCDC138Q96M89 665 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 SLC46A1Q96NT5 459 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 CGREF1Q99674 301 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 ZCCHC2Q9C0B9 1178 aaKnown RBP16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 IL1RL2Q9HB29 575 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 TMEM9Q9P0T7 183 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 RALYQ9UKM9 306 aaKnown RBP16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 RNF11Q9Y3C5 154 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 PCDHGA8Q9Y5G5 932 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 CCDC187A0A096LP49 1063 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 CDRT15L2A8MXV6 281 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 ARPC2O15144 300 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 SEC22BO75396 215 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 PSIP1O75475 530 aaKnown RBP16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 HSD3B1P14060 373 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 HSD3B2P26439 372 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 MAP4P27816 1152 aaKnown RBP16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 PNLIPRP1P54315 467 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 CLDN8P56748 225 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 SQSTM1Q13501 440 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 C19orf48Q6RUI8 117 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 UGT2A3Q6UWM9 527 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 FAM83HQ6ZRV2 1179 aaPredicted RBP16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 SNX31Q8N9S9 440 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 WDR36Q8NI36 951 aaKnown RBP16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 DNAJB14Q8TBM8 379 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 CANT1Q8WVQ1 401 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 LRTOMTQ8WZ04 291 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 ELMO1Q92556 727 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 FGF11Q92914 225 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 CENPNQ96H22 339 aaPredicted RBP16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 ZNF514Q96K75 400 aaPredicted RBP16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 FOPNLQ96NB1 174 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 GBP5Q96PP8 586 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 SLC39A3Q9BRY0 314 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 CCM2Q9BSQ5 444 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 C9orf16Q9BUW7 83 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 ACTL8Q9H568 366 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 CLMPQ9H6B4 373 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 ZNF624Q9P2J8 865 aaPredicted RBP16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 AP4B1Q9Y6B7 739 aa16.55■□□□□ 0.24
RBFOX1-207ENST00000547338 LOC400499M0QZD8 3231 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 MGAQ8IWI9 3026 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 PRAMEF33A0A0G2JMD5 474 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 ERN1O75460 977 aaKnown RBP16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 TNFAIP8O95379 198 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 CPNE6O95741 557 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 CATP04040 527 aaKnown RBP16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 ITPKBP27987 946 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 GDF5P43026 501 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 PRLHRP49683 370 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 HHEXQ03014 270 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 CSTF3Q12996 717 aaKnown RBP16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 CAPRIN1Q14444 709 aaKnown RBP16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 C16orf72Q14CZ0 275 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 DPY19L1Q2PZI1 675 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 TIGD2Q4W5G0 525 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 TBCELQ5QJ74 424 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 CYP2R1Q6VVX0 501 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 TRAPPC5Q8IUR0 188 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 SLC13A3Q8WWT9 602 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 TMEM159Q96B96 161 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 PPWD1Q96BP3 646 aaKnown RBP16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 CCDC115Q96NT0 180 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 CENPKQ9BS16 269 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 OSGEPL1Q9H4B0 414 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 ELOVL6Q9H5J4 265 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 RMND5AQ9H871 391 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 WDR37Q9Y2I8 494 aa16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 POLR3HQ9Y535 204 aaPredicted RBP16.54■□□□□ 0.24
RBFOX1-207ENST00000547338 KCNE1BA0A087WTH5 132 aa16.53■□□□□ 0.24
RBFOX1-207ENST00000547338 IGHV5-10-1A0A0J9YXX1 117 aa16.53■□□□□ 0.24
RBFOX1-207ENST00000547338 OR2AG2A6NM03 316 aa16.53■□□□□ 0.24
RBFOX1-207ENST00000547338 TXNDC9O14530 226 aa16.53■□□□□ 0.24
RBFOX1-207ENST00000547338 UBTFL6P0CB48 400 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms