RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 TUBB4AP04350 444 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 INHBBP09529 407 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 ETS1P14921 441 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 JAK1P23458 1154 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 ADH7P40394 386 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 SKIV2L2P42285 1042 aaKnown RBP11.87□□□□□ -0.51
SCAF11-208ENST00000546534 CLCN7P51798 805 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 NAP1L1P55209 391 aaKnown RBP11.87□□□□□ -0.51
SCAF11-208ENST00000546534 ADARP55265 1226 aaKnown RBP11.87□□□□□ -0.51
SCAF11-208ENST00000546534 OLR1P78380 273 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 HERC3Q15034 1050 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 RPS6KA1Q15418 735 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 RTL6Q6ICC9 239 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 MRNIPQ6NTE8 343 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 CES3Q6UWW8 571 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 CLEC9AQ6UXN8 241 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 B3GNT6Q6ZMB0 384 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 KIAA0408Q6ZU52 694 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 PRIMA1Q86XR5 153 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 AFAP1L2Q8N4X5 818 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 PRELID2Q8N945 189 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 LRRC57Q8N9N7 239 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 APCDD1LQ8NCL9 501 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 ACRBPQ8NEB7 543 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 GIMAP7Q8NHV1 300 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 ARSGQ96EG1 525 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 FAM129AQ9BZQ8 928 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 ZDHHC11Q9H8X9 412 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 TIMMDC1Q9NPL8 285 aa11.87□□□□□ -0.51
SCAF11-208ENST00000546534 CCDC177Q9NQR7 707 aaPredicted RBP11.87□□□□□ -0.51
SCAF11-208ENST00000546534 NSD1Q96L73 2696 aaPredicted RBP11.86□□□□□ -0.51
SCAF11-208ENST00000546534 IGKV3D-11A0A0A0MRZ8 115 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 TRBV11-1A0A0K0K1C0 115 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 TCRBV16S1A1N1A0A5B0 115 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 FIGNL2A6NMB9 653 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 A6NNC1 897 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 BCKDKO14874 412 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 SLC16A5O15375 505 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 ZBTB14O43829 449 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 SLC35G6P0C7Q6 338 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 MAOAP21397 527 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 ADSLP30566 484 aaPredicted RBP11.86□□□□□ -0.51
SCAF11-208ENST00000546534 TBPL1P62380 186 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 MEF2AQ02078 507 aaPredicted RBP11.86□□□□□ -0.51
SCAF11-208ENST00000546534 PLGLB1Q02325 96 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 HYAL2Q12891 473 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 TBX2Q13207 712 aaPredicted RBP11.86□□□□□ -0.51
SCAF11-208ENST00000546534 CUL1Q13616 776 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 OASLQ15646 514 aaKnown RBP11.86□□□□□ -0.51
SCAF11-208ENST00000546534 DEFB113Q30KQ7 82 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 SLC25A35Q3KQZ1 300 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 DEFB134Q4QY38 66 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 RNF187Q5TA31 235 aaPredicted RBP11.86□□□□□ -0.51
SCAF11-208ENST00000546534 PAMR1Q6UXH9 720 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 CYHR1Q6ZMK1 362 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 QSOX2Q6ZRP7 698 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 WDR53Q7Z5U6 358 aaPredicted RBP11.86□□□□□ -0.51
SCAF11-208ENST00000546534 CCDC170Q8IYT3 715 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 PSD4Q8NDX1 1056 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 ZNF740Q8NDX6 193 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 OR2M7Q8NG81 312 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 CREB3L4Q8TEY5 395 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 MFSD3Q96ES6 412 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 SMC6Q96SB8 1091 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 TCF12Q99081 682 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 DMRT3Q9NQL9 472 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 NECTIN3Q9NQS3 549 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 KCMF1Q9P0J7 381 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 FBXW2Q9UKT8 454 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 PACSIN2Q9UNF0 486 aaPredicted RBP11.86□□□□□ -0.51
SCAF11-208ENST00000546534 LIPGQ9Y5X9 500 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 FN1P02751 2386 aaKnown RBP11.86□□□□□ -0.51
SCAF11-208ENST00000546534 JMJD1CQ15652 2540 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 ZNF407Q9C0G0 2248 aa11.86□□□□□ -0.51
SCAF11-208ENST00000546534 GRID2IPA4D2P6 1211 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 OR14I1A6ND48 311 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 PFDN6O15212 129 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 LIASO43766 372 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 ATE1O95260 518 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 RAF1P04049 648 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 MPC1LP0DKB6 136 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 ALOX12P18054 663 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 HOXC12P31275 282 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 NPY2RP49146 381 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 CLCN2P51788 898 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 CENPUQ71F23 418 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 C17orf64Q86WR6 236 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 TC2NQ8N9U0 490 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 MFSD9Q8NBP5 474 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 ZNF592Q92610 1267 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 SLCO2A1Q92959 643 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 CALR3Q96L12 384 aaKnown RBP11.85□□□□□ -0.51
SCAF11-208ENST00000546534 KIFC1Q9BW19 673 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 TTTY12Q9BZ98 90 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 IL22Q9GZX6 179 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 BFARQ9NZS9 450 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 ZNF223Q9UK11 482 aaPredicted RBP11.85□□□□□ -0.51
SCAF11-208ENST00000546534 ERVK-11Q9UQG0 969 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 MED16Q9Y2X0 877 aa11.85□□□□□ -0.51
SCAF11-208ENST00000546534 DNAJC13O75165 2243 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms