RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 ZWINTO95229 277 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 CCL4P13236 92 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 CPA3P15088 417 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 FOLR1P15328 257 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 NPPBP16860 134 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 GNAZP19086 355 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 EPORP19235 508 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 HRH2P25021 359 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 ETV5P41161 510 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 TSPAN7P41732 249 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 ETV4P43268 484 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 CCR8P51685 355 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 PRKAA2P54646 552 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 ACY1Q03154 408 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 FOXM1Q08050 763 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 GPR19Q15760 415 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 CATSPEREQ5SY80 951 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 LIPMQ5VYY2 423 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 FCRL6Q6DN72 434 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 FIGLAQ6QHK4 219 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 GOLGA7Q7Z5G4 137 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 TEX9Q8N6V9 391 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 ZNF655Q8N720 491 aaPredicted RBP6.05□□□□□ -1.44
PRKDC-211ENST00000546304 ABHD11Q8NFV4 315 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 N4BP2L2Q92802 583 aaPredicted RBP6.05□□□□□ -1.44
PRKDC-211ENST00000546304 ARL8AQ96BM9 186 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 CCDC126Q96EE4 140 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 L3HYPDHQ96EM0 354 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 ATP6V1G3Q96LB4 118 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 OR6C1Q96RD1 312 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 ZFYVE21Q9BQ24 234 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 SELENOSQ9BQE4 189 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 PLCD4Q9BRC7 762 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 C1QTNF3Q9BXJ4 246 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 EHD1Q9H4M9 534 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 POLR1BQ9H9Y6 1135 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 PELI2Q9HAT8 420 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 FAM60AQ9NP50 221 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 FGF21Q9NSA1 209 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 OCIAD1Q9NX40 245 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 SNX7Q9UNH6 387 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 ANGPTL3Q9Y5C1 460 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 PCDHGA8Q9Y5G5 932 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 PTPRQQ9UMZ3 2332 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 NUP210LQ5VU65 1888 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 A0A0J9YVX5 310 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 TRBC2A0A5B9 178 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 MED19A0JLT2 244 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-211ENST00000546304 FITM1A5D6W6 292 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 HMGB1P1B2RPK0 211 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-211ENST00000546304 H7BY64 318 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 CLGNO14967 610 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 ZSCAN9O15535 394 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-211ENST00000546304 HCRTR1O43613 425 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 PRAMEF4O60810 478 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 BPGMP07738 259 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 FGF3P11487 239 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-211ENST00000546304 CD22P20273 847 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 HPDP32754 393 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-211ENST00000546304 GRK3P35626 688 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 ARL1P40616 181 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-211ENST00000546304 BCL6P41182 706 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 GABRA4P48169 554 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 MAPK10P53779 464 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 ITGA1P56199 1179 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 RPS15AP62244 130 aaKnown RBP6.04□□□□□ -1.44
PRKDC-211ENST00000546304 CSNK1G2P78368 415 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 SHC2P98077 582 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 MC2RQ01718 297 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 MEF2AQ02078 507 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-211ENST00000546304 IRF8Q02556 426 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 LCP2Q13094 533 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 TRAF3Q13114 568 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 CHIT1Q13231 466 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 GTF2H2Q13888 395 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 COL9A2Q14055 689 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-211ENST00000546304 E2F2Q14209 437 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 IL11RAQ14626 422 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 RBBP7Q16576 425 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 MLANAQ16655 118 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 XKR6Q5GH73 641 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 ZC3H12BQ5HYM0 836 aaKnown RBP6.04□□□□□ -1.44
PRKDC-211ENST00000546304 PAGE2BQ5JRK9 111 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 ZNF678Q5SXM1 525 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 PRAMEF9Q5VWM5 478 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 ATG9BQ674R7 924 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 GTF2H2CQ6P1K8 395 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 FRMD7Q6ZUT3 714 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 RPS27LQ71UM5 84 aaKnown RBP6.04□□□□□ -1.44
PRKDC-211ENST00000546304 PPP1R3BQ86XI6 285 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 MYLK4Q86YV6 388 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-211ENST00000546304 PLD3Q8IV08 490 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 C10orf107Q8IVU9 208 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.04□□□□□ -1.44
PRKDC-211ENST00000546304 LILRA2Q8N149 483 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 DNAJC22Q8N4W6 341 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 TBC1D19Q8N5T2 526 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 CSNK1A1LQ8N752 337 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 ANKRD42Q8N9B4 389 aa6.04□□□□□ -1.44
PRKDC-211ENST00000546304 OR52B6Q8NGF0 335 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms