RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 M0QZQ0 153 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 CCRL2O00421 344 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 OR1I1O60431 355 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 IFNA7P01567 189 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 MT-ND5P03915 603 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 HNRNPA1P09651 372 aaKnown RBP eCLIP12.09□□□□□ -0.47
COL4A6-209ENST00000545689 ZNF20P17024 532 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 CLDN8P56748 225 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 DECR1Q16698 335 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.09□□□□□ -0.47
COL4A6-209ENST00000545689 SLC29A4Q7RTT9 530 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 FAM83CQ9BQN1 747 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 CLCA3PQ9Y6N3 262 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 MRPS14O60783 128 aaKnown RBP12.09□□□□□ -0.47
COL4A6-209ENST00000545689 CYB5AP00167 134 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 HK1P19367 917 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 GGT1P19440 569 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 MANEALQ5VSG8 457 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 TMEM17Q86X19 198 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 AUTS2Q8WXX7 1259 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 HERC2P3Q9BVR0 1158 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 TSSK6Q9BXA6 273 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 GIMAP2Q9UG22 337 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 BAIAP2Q9UQB8 552 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 ZCWPW2A0A1B0GU75 182 aa12.08□□□□□ -0.47
COL4A6-209ENST00000545689 ACRP10323 421 aa12.08□□□□□ -0.47
COL4A6-209ENST00000545689 BCKDHAP12694 445 aa12.08□□□□□ -0.47
COL4A6-209ENST00000545689 HOXD8P13378 290 aaPredicted RBP12.08□□□□□ -0.47
COL4A6-209ENST00000545689 PTPRCAPQ14761 206 aa12.08□□□□□ -0.47
COL4A6-209ENST00000545689 SLC22A16Q86VW1 577 aa12.08□□□□□ -0.47
COL4A6-209ENST00000545689 GRHL3Q8TE85 626 aa12.08□□□□□ -0.47
COL4A6-209ENST00000545689 ASPNQ9BXN1 380 aa12.08□□□□□ -0.47
COL4A6-209ENST00000545689 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.08□□□□□ -0.47
COL4A6-209ENST00000545689 DZANK1Q9NVP4 752 aa12.08□□□□□ -0.47
COL4A6-209ENST00000545689 LIPT1Q9Y234 373 aa12.08□□□□□ -0.47
COL4A6-209ENST00000545689 TLX2O43763 284 aaPredicted RBP12.08□□□□□ -0.48
COL4A6-209ENST00000545689 CDRT1O95170 752 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 MYF6P23409 242 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 HOXA11P31270 313 aaPredicted RBP12.08□□□□□ -0.48
COL4A6-209ENST00000545689 PITX1P78337 314 aaPredicted RBP12.08□□□□□ -0.48
COL4A6-209ENST00000545689 LMAN2Q12907 356 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 KCNAB2Q13303 367 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 CAMK1Q14012 370 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 KLHL26Q53HC5 615 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 XKRXQ6PP77 449 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 FKBP10Q96AY3 582 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 MUS81Q96NY9 551 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 CTPS2Q9NRF8 586 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 IGSF5Q9NSI5 407 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 NENFQ9UMX5 172 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 A0A0G2JN53 185 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF840PA6NDX5 716 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 SLITRK5O94991 958 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 BMP2P12643 396 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 GDI1P31150 447 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 CARTPTQ16568 116 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF548Q8NEK5 533 aaPredicted RBP12.08□□□□□ -0.48
COL4A6-209ENST00000545689 KLK6Q92876 244 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 SAMD11Q96NU1 681 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 NSUN5Q96P11 429 aaKnown RBP12.08□□□□□ -0.48
COL4A6-209ENST00000545689 CITED4Q96RK1 184 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 WDR37Q9Y2I8 494 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 WNT6Q9Y6F9 365 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 AHDC1Q5TGY3 1603 aaPredicted RBP12.08□□□□□ -0.48
COL4A6-209ENST00000545689 G3V2L1 256 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 AKIRIN2Q53H80 203 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF227Q86WZ6 799 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF675Q8TD23 568 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 RGS17Q9UGC6 210 aaPredicted RBP12.08□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF451Q9Y4E5 1061 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 MYH1P12882 1939 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 TSPAN9O75954 239 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 AHCYP23526 432 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 HMGCLP35914 325 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 NUDT6P53370 316 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 TSPAN5P62079 268 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 MAPK14Q16539 360 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 BAIAP2L2Q6UXY1 529 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 ERN2Q76MJ5 926 aaKnown RBP12.08□□□□□ -0.48
COL4A6-209ENST00000545689 ADAD1Q96M93 576 aaKnown RBP12.08□□□□□ -0.48
COL4A6-209ENST00000545689 MNTQ99583 582 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 KXD1Q9BQD3 176 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 SPHK2Q9NRA0 654 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 SDHAF3Q9NRP4 125 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 ARMC1Q9NVT9 282 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 MALT1Q9UDY8 824 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 CDH10Q9Y6N8 788 aa12.08□□□□□ -0.48
COL4A6-209ENST00000545689 A0A0J9YVX5 310 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 WRBO00258 174 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF8P17098 575 aaPredicted RBP12.07□□□□□ -0.48
COL4A6-209ENST00000545689 PCBP2Q15366 365 aaKnown RBP eCLIP12.07□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF280BQ86YH2 543 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 CMTR2Q8IYT2 770 aaKnown RBP12.07□□□□□ -0.48
COL4A6-209ENST00000545689 PNLDC1Q8NA58 520 aaKnown RBP12.07□□□□□ -0.48
COL4A6-209ENST00000545689 TSTD1Q8NFU3 115 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 MYRFLQ96LU7 910 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 FAM129BQ96TA1 746 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 TBX5Q99593 518 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 WASH4PA8MWX3 477 aa12.07□□□□□ -0.48
COL4A6-209ENST00000545689 TSPAN6O43657 245 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms