RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	PWWP2A	Q96N64	755 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	OR2A5	Q96R48	311 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	SMAD5	Q99717	465 aa	Known RBP	7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	NUDT9	Q9BW91	350 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	TRIM31	Q9BZY9	425 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	SYNPO2L	Q9H987	977 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	ZNF304	Q9HCX3	659 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	AP5S1	Q9NUS5	200 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	NSMCE4A	Q9NXX6	385 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	MOCS1	Q9NZB8	636 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	C5AR2	Q9P296	337 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	ZNF282	Q9UDV7	671 aa	Predicted RBP	7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	ADAMTS6	Q9UKP5	1117 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	CDC14A	Q9UNH5	594 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	PDE10A	Q9Y233	779 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	RUVBL1	Q9Y265	456 aa	Known RBP	7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	ASH1L	Q9NR48	2969 aa	Known RBP	7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	RELN	P78509	3460 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	SPTBN1	Q01082	2364 aa	Known RBP	7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	KCNE1B	A0A087WTH5	132 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	PABPN1L	A6NDY0	278 aa	Known RBP	7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	HAT1	O14929	419 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	EIF3H	O15372	352 aa	Known RBP eCLIP	7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	DLX3	O60479	287 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	IPO13	O94829	963 aa	Known RBP	7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	SORBS2	O94875	1100 aa	Known RBP	7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	MED26	O95402	600 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	EIF2S1	P05198	315 aa	Known RBP	7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	IFNGR1	P15260	489 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	HIST1H2AD	P20671	130 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	FBL	P22087	321 aa	Known RBP	7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	OR1D4	P47884	311 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	CD97	P48960	835 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	SOX8	P57073	446 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	FOXL2	P58012	376 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	RPS15A	P62244	130 aa	Known RBP	7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	OCA2	Q04671	838 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	CALCOCO2	Q13137	446 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	AIMP2	Q13155	320 aa	Known RBP	7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	FAM53B	Q14153	422 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	MYBPC3	Q14896	1274 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	PHKG1	Q16816	387 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	MSMP	Q1L6U9	139 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	HKDC1	Q2TB90	917 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	FBXO42	Q6P3S6	717 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	AGTRAP	Q6RW13	159 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	LCTL	Q6UWM7	567 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	SBSN	Q6UWP8	590 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	MBOAT1	Q6ZNC8	495 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	ZNF572	Q7Z3I7	529 aa	Predicted RBP	7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	MAATS1	Q7Z4T9	603 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	ADCK2	Q7Z695	626 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	ZC3HC1	Q86WB0	502 aa	Known RBP	7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	ZBED8	Q8IZ13	594 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	GALNT16	Q8N428	558 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	METTL27	Q8N6F8	245 aa	Predicted RBP	7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	ANKRD7	Q92527	254 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	MIB2	Q96AX9	1013 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	PDLIM5	Q96HC4	596 aa	Known RBP	7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	HIST1H2AH	Q96KK5	128 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	PTCHD1	Q96NR3	888 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	OLFM1	Q99784	485 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	HIST1H2AJ	Q99878	128 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	ERP44	Q9BS26	406 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	HAUS8	Q9BT25	410 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	MCMBP	Q9BTE3	642 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	H2AFJ	Q9BTM1	129 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	SGPP1	Q9BX95	441 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	FAM129A	Q9BZQ8	928 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	DRC3	Q9H069	523 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	RHOJ	Q9H4E5	214 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	TMEM184C	Q9NVA4	438 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	C14orf105	Q9NVL8	296 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	ARL15	Q9NXU5	204 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	TNFRSF10D	Q9UBN6	386 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	CDC23	Q9UJX2	597 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	FBXL4	Q9UKA2	621 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	VWA7	Q9Y334	891 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	SNX24	Q9Y343	169 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	PSAT1	Q9Y617	370 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	HS3ST3B1	Q9Y662	390 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440	MAU2	Q9Y6X3	613 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440		U3KQE9	123 aa		7.29	□□□□□ -1.24
SNHG1-223	ENST00000545440		A0A1W2PQ72	361 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440		H7BY64	318 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	SOCS6	O14544	535 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	PCDH17	O14917	1159 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	P2RX6	O15547	441 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	RAD51C	O43502	376 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	NPHS1	O60500	1241 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	WNT11	O96014	354 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	THBD	P07204	575 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	CYC1	P08574	325 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	ANXA5	P08758	320 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	ZGLP1	P0C6A0	271 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	CASQ1	P31415	396 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	SLC26A3	P40879	764 aa		7.28	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms