RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 TMX2-CTNND1H3BSU7 103 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 TNFRSF11BO00300 401 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 PLK4O00444 970 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 PCDHGA12O60330 932 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 PAPLNO95428 1278 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 OCM2P0CE71 109 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 OCMP0CE72 109 aaPredicted RBP11.95□□□□□ -0.5
PAAF1-215ENST00000544909 ADH5P11766 374 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 KELP23276 732 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 ACADLP28330 430 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 RRM2P31350 389 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 SCARB2Q14108 478 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 DHCR24Q15392 516 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 CYP2A13Q16696 494 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 HNRNPA1L2Q32P51 320 aaKnown RBP11.95□□□□□ -0.5
PAAF1-215ENST00000544909 TMEM52BQ4KMG9 183 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 ANKRD34AQ69YU3 496 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 ERN2Q76MJ5 926 aaKnown RBP11.95□□□□□ -0.5
PAAF1-215ENST00000544909 ARMCX6Q7L4S7 300 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 PAGE2Q7Z2X7 111 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 DCUN1D3Q8IWE4 304 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 ENTHD1Q8IYW4 607 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 NAGSQ8N159 534 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 RASSF5Q8WWW0 418 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 SLC38A4Q969I6 547 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 BARD1Q99728 777 aaKnown RBP11.95□□□□□ -0.5
PAAF1-215ENST00000544909 MAPKAP1Q9BPZ7 522 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 MROQ9BYG7 248 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 LINC00597Q9H2U6 94 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 LTB4R2Q9NPC1 389 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 IL23AQ9NPF7 189 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 GPATCH2Q9NW75 528 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 HCFC1R1Q9NWW0 138 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 ERVK-18Q9QC07 812 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 PSORS1C1Q9UIG5 152 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 CLCA1A8K7I4 914 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 GCM2O75603 506 aaPredicted RBP11.94□□□□□ -0.5
PAAF1-215ENST00000544909 PDE9AO76083 593 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 MT-ND2P03891 347 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 PORP16435 677 aaPredicted RBP11.94□□□□□ -0.5
PAAF1-215ENST00000544909 RHCEP18577 417 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 UQCRC2P22695 453 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 FMO3P31513 532 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 XCR1P46094 333 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 LIMS1P48059 325 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 MASP1P48740 699 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 CD97P48960 835 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 PRIM2P49643 509 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 CDK6Q00534 326 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 PPP1R8Q12972 351 aaKnown RBP11.94□□□□□ -0.5
PAAF1-215ENST00000544909 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.94□□□□□ -0.5
PAAF1-215ENST00000544909 DSG4Q86SJ6 1040 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 ZNF605Q86T29 641 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 CCDC71Q8IV32 467 aaPredicted RBP11.94□□□□□ -0.5
PAAF1-215ENST00000544909 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.94□□□□□ -0.5
PAAF1-215ENST00000544909 ETFBKMTQ8IXQ9 262 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 OR10G2Q8NGC3 310 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 C16orf78Q8WTQ4 265 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 CYB5D2Q8WUJ1 264 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 CRELD1Q96HD1 420 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 TPD52L3Q96J77 140 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 PIP5K1AQ99755 562 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 RACGAP1Q9H0H5 632 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 ZNF556Q9HAH1 456 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 CNOT2Q9NZN8 540 aaKnown RBP11.94□□□□□ -0.5
PAAF1-215ENST00000544909 SPATA7Q9P0W8 599 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 SPASTQ9UBP0 616 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 KCND3Q9UK17 655 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 ADAM29Q9UKF5 820 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 NUP210Q8TEM1 1887 aaPredicted RBP11.94□□□□□ -0.5
PAAF1-215ENST00000544909 DOCK6Q96HP0 2047 aa11.94□□□□□ -0.5
PAAF1-215ENST00000544909 DENND4AQ7Z401 1863 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 SAGE2PA6NJ88 616 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 RFPL2O75678 378 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 CYP17A1P05093 508 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 HNRNPCP07910 306 aaKnown RBP eCLIP11.93□□□□□ -0.5
PAAF1-215ENST00000544909 PDHA2P29803 388 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 CD40LGP29965 261 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 CRATP43155 626 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 ALDH9A1P49189 494 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 GRIN2CQ14957 1233 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 OXA1LQ15070 435 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 CCSMST1Q4G0I0 132 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 PRAMEF14Q5SWL7 426 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 PRAMEF13Q5VWM6 474 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 TMIGD1Q6UXZ0 262 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 ADAMTSL4Q6UY14 1074 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 TMCO2Q7Z6W1 182 aaPredicted RBP11.93□□□□□ -0.5
PAAF1-215ENST00000544909 SLCO6A1Q86UG4 719 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 PDZD3Q86UT5 571 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 IGFN1Q86VF2 1251 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 FAM129CQ86XR2 697 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 TRAPPC5Q8IUR0 188 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 CENPSQ8N2Z9 138 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 RNF175Q8N4F7 328 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 DNAJC22Q8N4W6 341 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 CDC26Q8NHZ8 85 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 SPPL2AQ8TCT8 520 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 APH1BQ8WW43 257 aa11.93□□□□□ -0.5
PAAF1-215ENST00000544909 ABTB1Q969K4 478 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms