RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 QRFPRQ96P65 431 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 IP6K3Q96PC2 410 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 CDK15Q96Q40 435 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 SOX17Q9H6I2 414 aaPredicted RBP18.09■□□□□ 0.49
DDX55-211ENST00000544429 SEMA3GQ9NS98 782 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 PSD3Q9NYI0 1048 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 PPT2Q9UMR5 302 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 PLLPQ9Y342 182 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 ATRXP46100 2492 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 BOD1L1Q8NFC6 3051 aa18.09■□□□□ 0.49
DDX55-211ENST00000544429 A0A1W2PQ72 361 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 SOCS6O14544 535 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 FFAR3O14843 346 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 GPR42O15529 346 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 TYROBPO43914 113 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 CYC1P08574 325 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 CREB1P16220 341 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 HPDP32754 393 aaPredicted RBP18.08■□□□□ 0.48
DDX55-211ENST00000544429 CCNG1P51959 295 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 DNAJB13P59910 316 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 RAB8AP61006 207 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 SKP1P63208 163 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 CLCQ05315 142 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 DEFB109BQ30KR1 87 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 ABHD17CQ6PCB6 329 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 SHISA6Q6ZSJ9 500 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 UBE3DQ7Z6J8 389 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 RAB43Q86YS6 212 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 LSM14AQ8ND56 463 aaKnown RBP18.08■□□□□ 0.48
DDX55-211ENST00000544429 OR5T3Q8NGG3 340 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 APOBEC4Q8WW27 367 aaKnown RBP18.08■□□□□ 0.48
DDX55-211ENST00000544429 REXO4Q9GZR2 422 aaKnown RBP18.08■□□□□ 0.48
DDX55-211ENST00000544429 GSTO2Q9H4Y5 243 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 SEMA4BQ9NPR2 832 aaPredicted RBP18.08■□□□□ 0.48
DDX55-211ENST00000544429 DMRT3Q9NQL9 472 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 SENP1Q9P0U3 644 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 HS3ST3B1Q9Y662 390 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 SMG1Q96Q15 3661 aaKnown RBP18.08■□□□□ 0.48
DDX55-211ENST00000544429 PIEZO2Q9H5I5 2752 aa18.08■□□□□ 0.48
DDX55-211ENST00000544429 SCN2AQ99250 2005 aa18.07■□□□□ 0.48
DDX55-211ENST00000544429 ZNF860A6NHJ4 632 aa18.07■□□□□ 0.48
DDX55-211ENST00000544429 FOXE1O00358 373 aaPredicted RBP18.07■□□□□ 0.48
DDX55-211ENST00000544429 ATXN7O15265 892 aaPredicted RBP18.07■□□□□ 0.48
DDX55-211ENST00000544429 SCELO95171 688 aa18.07■□□□□ 0.48
DDX55-211ENST00000544429 OTCP00480 354 aa18.07■□□□□ 0.48
DDX55-211ENST00000544429 ATXN8OSP0DMR3 200 aa18.07■□□□□ 0.48
DDX55-211ENST00000544429 MYL2P10916 166 aa18.07■□□□□ 0.48
DDX55-211ENST00000544429 IL10P22301 178 aa18.07■□□□□ 0.48
DDX55-211ENST00000544429 ATP1A4Q13733 1029 aa18.07■□□□□ 0.48
DDX55-211ENST00000544429 ZRSR2Q15696 482 aaKnown RBP18.07■□□□□ 0.48
DDX55-211ENST00000544429 CPSF6Q16630 551 aaKnown RBP eCLIP18.07■□□□□ 0.48
DDX55-211ENST00000544429 TMEM35AQ53FP2 167 aa18.07■□□□□ 0.48
DDX55-211ENST00000544429 C10orf62Q5T681 223 aaPredicted RBP18.07■□□□□ 0.48
DDX55-211ENST00000544429 LETMD1Q6P1Q0 360 aa18.07■□□□□ 0.48
DDX55-211ENST00000544429 MYRIPQ8NFW9 859 aa18.07■□□□□ 0.48
DDX55-211ENST00000544429 OR4F6Q8NGB9 312 aa18.07■□□□□ 0.48
DDX55-211ENST00000544429 PGM2Q96G03 612 aa18.07■□□□□ 0.48
DDX55-211ENST00000544429 BBC3Q96PG8 261 aaPredicted RBP18.07■□□□□ 0.48
DDX55-211ENST00000544429 OR1F2PQ96R84 312 aa18.07■□□□□ 0.48
DDX55-211ENST00000544429 F2RL3Q96RI0 385 aa18.07■□□□□ 0.48
DDX55-211ENST00000544429 ZNF382Q96SR6 550 aa18.07■□□□□ 0.48
DDX55-211ENST00000544429 PRDM7Q9NQW5 492 aa18.07■□□□□ 0.48
DDX55-211ENST00000544429 LANCL2Q9NS86 450 aa18.07■□□□□ 0.48
DDX55-211ENST00000544429 OXSMQ9NWU1 459 aa18.07■□□□□ 0.48
DDX55-211ENST00000544429 HCN3Q9P1Z3 774 aa18.07■□□□□ 0.48
DDX55-211ENST00000544429 MAN2B2Q9Y2E5 1009 aa18.07■□□□□ 0.48
DDX55-211ENST00000544429 DOCK10Q96BY6 2186 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 IDSB3KWA1 339 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 ERI3O43414 337 aaKnown RBP18.06■□□□□ 0.48
DDX55-211ENST00000544429 SUPT7LO94864 414 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 IGHEP01854 428 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 CPA3P15088 417 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 OTX2P32243 289 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 XCR1P46094 333 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 ARFIP1P53367 373 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 NAA20P61599 178 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 PCLAFQ15004 111 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 CEP85LQ5SZL2 805 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 DEPDC1Q5TB30 811 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 KIRREL2Q6UWL6 708 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 CROCCP2Q86T23 111 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 RNF175Q8N4F7 328 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 CCT6BQ92526 530 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 REPS1Q96D71 796 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 CMTM7Q96FZ5 175 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 MAGEB10Q96LZ2 347 aaPredicted RBP18.06■□□□□ 0.48
DDX55-211ENST00000544429 CRB3Q9BUF7 120 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 NPLQ9BXD5 320 aaPredicted RBP18.06■□□□□ 0.48
DDX55-211ENST00000544429 SSU72Q9NP77 194 aaKnown RBP18.06■□□□□ 0.48
DDX55-211ENST00000544429 ACSS2Q9NR19 701 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 P4HTMQ9NXG6 502 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 C3orf18Q9UK00 162 aa18.06■□□□□ 0.48
DDX55-211ENST00000544429 LOC102723996A0A087X1L8 192 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 MAGEB17A8MXT2 336 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 AGPSO00116 658 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 PCDH17O14917 1159 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 RGS16O15492 202 aaPredicted RBP18.05■□□□□ 0.48
DDX55-211ENST00000544429 CHST10O43529 356 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 JRKO75564 520 aa18.05■□□□□ 0.48
DDX55-211ENST00000544429 PCNAP12004 261 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms