RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 RNF103O00237 685 aa3.56□□□□□ -1.84
RAP1B-224ENST00000541216 MAGEB2O15479 319 aa3.56□□□□□ -1.84
RAP1B-224ENST00000541216 MLNRO43193 412 aa3.56□□□□□ -1.84
RAP1B-224ENST00000541216 SNAP91O60641 907 aa3.56□□□□□ -1.84
RAP1B-224ENST00000541216 LRCH4O75427 683 aa3.56□□□□□ -1.84
RAP1B-224ENST00000541216 MT-ND2P03891 347 aa3.56□□□□□ -1.84
RAP1B-224ENST00000541216 RPN1P04843 607 aaKnown RBP3.56□□□□□ -1.84
RAP1B-224ENST00000541216 SP100P23497 879 aaPredicted RBP3.56□□□□□ -1.84
RAP1B-224ENST00000541216 LMO4P61968 165 aa3.56□□□□□ -1.84
RAP1B-224ENST00000541216 RBP5P82980 135 aa3.56□□□□□ -1.84
RAP1B-224ENST00000541216 ALDH1L2Q3SY69 923 aa3.56□□□□□ -1.84
RAP1B-224ENST00000541216 ZNF542PQ5EBM4 170 aa3.56□□□□□ -1.84
RAP1B-224ENST00000541216 FGD3Q5JSP0 725 aa3.56□□□□□ -1.84
RAP1B-224ENST00000541216 ARMC3Q5W041 872 aa3.56□□□□□ -1.84
RAP1B-224ENST00000541216 CHMP1BQ7LBR1 199 aa3.56□□□□□ -1.84
RAP1B-224ENST00000541216 MEX3DQ86XN8 651 aaKnown RBP3.56□□□□□ -1.84
RAP1B-224ENST00000541216 Q8N377 158 aa3.56□□□□□ -1.84
RAP1B-224ENST00000541216 NKAIN3Q8N8D7 197 aa3.56□□□□□ -1.84
RAP1B-224ENST00000541216 CD99L2Q8TCZ2 262 aa3.56□□□□□ -1.84
RAP1B-224ENST00000541216 CHURC1Q8WUH1 139 aa3.56□□□□□ -1.84
RAP1B-224ENST00000541216 SGF29Q96ES7 293 aa3.56□□□□□ -1.84
RAP1B-224ENST00000541216 FNDC4Q9H6D8 234 aaPredicted RBP3.56□□□□□ -1.84
RAP1B-224ENST00000541216 DNAJB9Q9UBS3 223 aa3.56□□□□□ -1.84
RAP1B-224ENST00000541216 HBS1LQ9Y450 684 aaKnown RBP3.56□□□□□ -1.84
RAP1B-224ENST00000541216 PRDM2Q13029 1718 aa3.56□□□□□ -1.84
RAP1B-224ENST00000541216 PTPRGP23470 1445 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 POGZQ7Z3K3 1410 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 IGHV3-38A0A0C4DH36 116 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 E5RGE8 158 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 IFIT3O14879 490 aaKnown RBP3.55□□□□□ -1.84
RAP1B-224ENST00000541216 WDR46O15213 610 aaKnown RBP3.55□□□□□ -1.84
RAP1B-224ENST00000541216 ST8SIA3O43173 380 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 SP9P0CG40 484 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 KRT3P12035 628 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 C4BPBP20851 252 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 SCN1BQ07699 218 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 BFSP1Q12934 665 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 SCARB2Q14108 478 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 SPANXN4Q5MJ08 99 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 NHLRC1Q6VVB1 395 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 GPRIN3Q6ZVF9 776 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 GALNTL5Q7Z4T8 443 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 DZIP1Q86YF9 867 aaKnown RBP3.55□□□□□ -1.84
RAP1B-224ENST00000541216 DND1Q8IYX4 353 aaKnown RBP3.55□□□□□ -1.84
RAP1B-224ENST00000541216 TDHQ8IZJ6 230 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 SIX6OS1Q8N1H7 587 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 METTL4Q8N3J2 472 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 TEX26Q8N6G2 289 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 OR10G7Q8NGN6 311 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 LRRC15Q8TF66 581 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 GRK7Q8WTQ7 553 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 BSCL2Q96G97 398 aaPredicted RBP3.55□□□□□ -1.84
RAP1B-224ENST00000541216 LGMNQ99538 433 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 GPATCH1Q9BRR8 931 aaKnown RBP3.55□□□□□ -1.84
RAP1B-224ENST00000541216 POLKQ9UBT6 870 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 SLC12A6Q9UHW9 1150 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 MUTYHQ9UIF7 546 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 NSG2Q9Y328 171 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 COLEC10Q9Y6Z7 277 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 ABCA5Q8WWZ7 1642 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 ALKQ9UM73 1620 aa3.55□□□□□ -1.84
RAP1B-224ENST00000541216 CUX1P39880 1505 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 ARAP3Q8WWN8 1544 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 COL5A2P05997 1499 aaPredicted RBP3.54□□□□□ -1.84
RAP1B-224ENST00000541216 FHAD1B1AJZ9 1412 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 IGHV4-30-2A0A087WSY4 118 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.54□□□□□ -1.84
RAP1B-224ENST00000541216 hCG_38984A0A1B0GV85 526 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 TFECO14948 347 aaPredicted RBP3.54□□□□□ -1.84
RAP1B-224ENST00000541216 ACSL4O60488 711 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 EEF2P13639 858 aaKnown RBP3.54□□□□□ -1.84
RAP1B-224ENST00000541216 GATA1P15976 413 aaPredicted RBP3.54□□□□□ -1.84
RAP1B-224ENST00000541216 BTG1P62324 171 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 ROR1Q01973 937 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 DHODHQ02127 395 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 FOLH1Q04609 750 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 PAX8Q06710 450 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 ZNF177Q13360 481 aaPredicted RBP3.54□□□□□ -1.84
RAP1B-224ENST00000541216 GRB14Q14449 540 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 LCLAT1Q6UWP7 414 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 PET117Q6UWS5 81 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 TRMT11Q7Z4G4 463 aaKnown RBP3.54□□□□□ -1.84
RAP1B-224ENST00000541216 SH2D6Q7Z4S9 175 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 PHLDB2Q86SQ0 1253 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 CROCCP3Q8IVE0 287 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 UXS1Q8NBZ7 420 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 ATP8B4Q8TF62 1192 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 PRMT1Q99873 361 aaKnown RBP3.54□□□□□ -1.84
RAP1B-224ENST00000541216 CITED2Q99967 270 aaPredicted RBP3.54□□□□□ -1.84
RAP1B-224ENST00000541216 MLPHQ9BV36 600 aaPredicted RBP3.54□□□□□ -1.84
RAP1B-224ENST00000541216 THUMPD3Q9BV44 507 aaKnown RBP3.54□□□□□ -1.84
RAP1B-224ENST00000541216 ITGA11Q9UKX5 1188 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 MRPS18CQ9Y3D5 142 aaKnown RBP3.54□□□□□ -1.84
RAP1B-224ENST00000541216 FANCAO15360 1455 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 WDR7Q9Y4E6 1490 aa3.54□□□□□ -1.84
RAP1B-224ENST00000541216 PTPRKQ15262 1439 aa3.53□□□□□ -1.84
RAP1B-224ENST00000541216 CUL7Q14999 1698 aa3.53□□□□□ -1.84
RAP1B-224ENST00000541216 IGKV3D-20A0A0C4DH25 116 aa3.53□□□□□ -1.84
RAP1B-224ENST00000541216 YDJCA8MPS7 323 aa3.53□□□□□ -1.84
RAP1B-224ENST00000541216 PGRMC2O15173 223 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms