RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 STSP08842 583 aa14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 GKN3PP0CG01 181 aa14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 CASP9P55211 416 aa14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 VLDLRP98155 873 aa14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 SLC25A25Q6KCM7 469 aa14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 DUS1LQ6P1R4 473 aaKnown RBP14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 LRRC69Q6ZNQ3 347 aa14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 RNF121Q9H920 327 aa14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 GPN2Q9H9Y4 310 aaPredicted RBP14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 OSER1Q9NX31 292 aa14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 MRPS23Q9Y3D9 190 aaKnown RBP14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 A0A1B0GVI7 797 aa14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 NME4O00746 187 aa14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 EEF1E1O43324 174 aaKnown RBP14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 DBIP07108 87 aaKnown RBP14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 NKX2-5P52952 324 aaPredicted RBP14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 ACTC1P68032 377 aa14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 ACTA1P68133 377 aa14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 MS4A2Q01362 244 aa14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 PRKCDQ05655 676 aa14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 EIF4HQ15056 248 aaKnown RBP14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 PROX2Q3B8N5 592 aa14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 PRAMEF14Q5SWL7 426 aa14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 PRAMEF13Q5VWM6 474 aa14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 SLC27A4Q6P1M0 643 aa14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 MIR1-1HGQ9H1L0 117 aa14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 NSUN3Q9H649 340 aaKnown RBP14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 KCNK13Q9HB14 408 aa14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 HEBP2Q9Y5Z4 205 aa14.47□□□□□ -0.09
SMARCA4-207ENST00000541122 C9IYK1 514 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 LHCGRP22888 699 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 VAMP2P63027 116 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 CD47Q08722 323 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 ZNF763Q0D2J5 394 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 PUM1Q14671 1186 aaKnown RBP eCLIP14.46□□□□□ -0.091e-7■□□□□ 10.5
SMARCA4-207ENST00000541122 NTRK2Q16620 822 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 FBXL22Q6P050 247 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 B3GNT4Q9C0J1 378 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 TP63Q9H3D4 680 aaPredicted RBP14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 EDARQ9UNE0 448 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 HS3ST4Q9Y661 456 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 ADAMTSL3P82987 1691 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 ANKRD66B4E2M5 251 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 RBMXL2O75526 392 aaKnown RBP14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 HSD3B1P14060 373 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 FUT4P22083 530 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 UQCRC2P22695 453 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 HSD3B2P26439 372 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 OLIG2Q13516 323 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 USP50Q70EL3 339 aaPredicted RBP14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 FBXO27Q8NI29 283 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 BBS10Q8TAM1 723 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 GPR151Q8TDV0 419 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 ASB15Q8WXK1 588 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 AGAP5A6NIR3 686 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 SEPT4O43236 478 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 RETP07949 1114 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 ARFRP1Q13795 201 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 GK3PQ14409 553 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 PON2Q15165 354 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 PRAMEF19Q5SWL8 479 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 TREML2Q5T2D2 321 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 ANKRD54Q6NXT1 300 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 NUP54Q7Z3B4 507 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 PARGQ86W56 976 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 CHDHQ8NE62 594 aaPredicted RBP14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 S100PBPQ96BU1 408 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 RBM18Q96H35 190 aaKnown RBP14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 ADAD1Q96M93 576 aaKnown RBP14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 NELL2Q99435 816 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 GON7Q9BXV9 100 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 SACM1LQ9NTJ5 587 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 TMEM248Q9NWD8 314 aa14.46□□□□□ -0.09
SMARCA4-207ENST00000541122 SLC38A8A6NNN8 435 aa14.46□□□□□ -0.1
SMARCA4-207ENST00000541122 TGFB1P01137 390 aa14.46□□□□□ -0.1
SMARCA4-207ENST00000541122 APOC3P02656 99 aa14.46□□□□□ -0.1
SMARCA4-207ENST00000541122 KLK1P06870 262 aa14.46□□□□□ -0.1
SMARCA4-207ENST00000541122 ZNF20P17024 532 aa14.46□□□□□ -0.1
SMARCA4-207ENST00000541122 VAMP1P23763 118 aa14.46□□□□□ -0.1
SMARCA4-207ENST00000541122 SLC6A6P31641 620 aa14.46□□□□□ -0.1
SMARCA4-207ENST00000541122 EXOC3L2Q2M3D2 409 aa14.46□□□□□ -0.1
SMARCA4-207ENST00000541122 FAM198BQ6UWH4 519 aa14.46□□□□□ -0.1
SMARCA4-207ENST00000541122 CEP97Q8IW35 865 aa14.46□□□□□ -0.1
SMARCA4-207ENST00000541122 HDDC3Q8N4P3 179 aa14.46□□□□□ -0.1
SMARCA4-207ENST00000541122 CHMP1AQ9HD42 196 aaPredicted RBP14.46□□□□□ -0.1
SMARCA4-207ENST00000541122 XRN1Q8IZH2 1706 aaKnown RBP14.45□□□□□ -0.1
SMARCA4-207ENST00000541122 ARVCFO00192 962 aa14.45□□□□□ -0.1
SMARCA4-207ENST00000541122 CREBL2O60519 120 aaPredicted RBP14.45□□□□□ -0.1
SMARCA4-207ENST00000541122 CELP19835 753 aa14.45□□□□□ -0.1
SMARCA4-207ENST00000541122 PPIGQ13427 754 aaKnown RBP eCLIP14.45□□□□□ -0.11e-6■■■□□ 15.5
SMARCA4-207ENST00000541122 PTCHD3Q3KNS1 767 aa14.45□□□□□ -0.1
SMARCA4-207ENST00000541122 PLEKHN1Q494U1 663 aaPredicted RBP14.45□□□□□ -0.1
SMARCA4-207ENST00000541122 LYSMD3Q7Z3D4 306 aa14.45□□□□□ -0.1
SMARCA4-207ENST00000541122 TMED4Q7Z7H5 227 aa14.45□□□□□ -0.1
SMARCA4-207ENST00000541122 YIPF7Q8N8F6 280 aa14.45□□□□□ -0.1
SMARCA4-207ENST00000541122 PNLDC1Q8NA58 520 aaKnown RBP14.45□□□□□ -0.1
SMARCA4-207ENST00000541122 MAFIPQ8WZ33 124 aa14.45□□□□□ -0.1
SMARCA4-207ENST00000541122 RIT1Q92963 219 aa14.45□□□□□ -0.1
SMARCA4-207ENST00000541122 MOAP1Q96BY2 351 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms