RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 AIREO43918 545 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 PRAMEF10O60809 474 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 JRKO75564 520 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 PTNP21246 168 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 SLC7A9P82251 487 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 SCARB2Q14108 478 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 ZNF846Q147U1 533 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 MED22Q15528 200 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 DGUOKQ16854 277 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 MPEG1Q2M385 716 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 CELF5Q8N6W0 485 aaKnown RBP13.11□□□□□ -0.31
BNIP3-202ENST00000540159 VN1R2Q8NFZ6 395 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 BTN2A2Q8WVV5 523 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 ZNF300Q96RE9 604 aaPredicted RBP13.11□□□□□ -0.31
BNIP3-202ENST00000540159 MACROD1Q9BQ69 325 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 TDP1Q9NUW8 608 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 FAM120CQ9NX05 1096 aaKnown RBP13.11□□□□□ -0.31
BNIP3-202ENST00000540159 IMPAD1Q9NX62 359 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 SMIM30A4D0T7 59 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 PRR23AA6NEV1 266 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 MMP20O60882 483 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 LATS1O95835 1130 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 PTHP01270 115 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 PSMB5P28074 263 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 ITGA1P56199 1179 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 TIGD6Q17RP2 521 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 SMU1Q2TAY7 513 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 INAVAQ3KP66 663 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 LIPJQ5W064 366 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 PARS2Q7L3T8 475 aaKnown RBP13.1□□□□□ -0.31
BNIP3-202ENST00000540159 C12orf40Q86WS4 652 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 SLAIN1Q8ND83 568 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 OR8J2Q8NGG1 315 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 UCN3Q969E3 161 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 FOPNLQ96NB1 174 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 DOHHQ9BU89 302 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 GPBP1L1Q9HC44 474 aaPredicted RBP13.1□□□□□ -0.31
BNIP3-202ENST00000540159 SPHK2Q9NRA0 654 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 TM7SF3Q9NS93 570 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 FEZF1A0PJY2 475 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 TLL1O43897 1013 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 CXCL10P02778 98 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 IL3P08700 152 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 SYN1P17600 705 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 TIA1P31483 386 aaKnown RBP eCLIP13.1□□□□□ -0.31
BNIP3-202ENST00000540159 NNMTP40261 264 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 CTSKP43235 329 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 HSPB3Q12988 150 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 DUSP7Q16829 419 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 HENMT1Q5T8I9 393 aaKnown RBP13.1□□□□□ -0.31
BNIP3-202ENST00000540159 MED27Q6P2C8 311 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 SLC39A5Q6ZMH5 540 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 CADM3Q8N126 398 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 CPXM2Q8N436 756 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 STX19Q8N4C7 294 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 DUSP12Q9UNI6 340 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 LAMA1P25391 3075 aa13.1□□□□□ -0.31
BNIP3-202ENST00000540159 C1orf226A1L170 272 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 PPM1DO15297 605 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 SLCO2B1O94956 709 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 APOL3O95236 402 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 MPC1LP0DKB6 136 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 NKX2-5P52952 324 aaPredicted RBP13.09□□□□□ -0.31
BNIP3-202ENST00000540159 IQCCQ4KMZ1 466 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 LIPIQ6XZB0 460 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 TSPYL5Q86VY4 417 aaPredicted RBP13.09□□□□□ -0.31
BNIP3-202ENST00000540159 FAM83FQ8NEG4 500 aaPredicted RBP13.09□□□□□ -0.31
BNIP3-202ENST00000540159 PPCDCQ96CD2 204 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 YIPF6Q96EC8 236 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 LMLNQ96KR4 655 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 CCM2Q9BSQ5 444 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 CENPOQ9BU64 300 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 EXOSC4Q9NPD3 245 aaKnown RBP13.09□□□□□ -0.31
BNIP3-202ENST00000540159 AKIP1Q9NQ31 210 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 MIEF1Q9NQG6 463 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 ASF1AQ9Y294 204 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 CYP7B1O75881 506 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 ADRA2AP08913 450 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 CTSAP10619 480 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 NPPBP16860 134 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 GRHL2Q6ISB3 625 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 GRASPQ7Z6J2 395 aaPredicted RBP13.09□□□□□ -0.31
BNIP3-202ENST00000540159 RBM45Q8IUH3 476 aaKnown RBP13.09□□□□□ -0.31
BNIP3-202ENST00000540159 DYNC2LI1Q8TCX1 351 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 CNDP2Q96KP4 475 aaKnown RBP13.09□□□□□ -0.31
BNIP3-202ENST00000540159 MS4A12Q9NXJ0 267 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 IL36AQ9UHA7 158 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 SCN2AQ99250 2005 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 ANKDD1BA6NHY2 528 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 GLOD5A6NK44 160 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 M0R082 166 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 NPC1O15118 1278 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 SLC22A1O15245 554 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 KDM1AO60341 852 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 PSIP1O75475 530 aaKnown RBP13.09□□□□□ -0.31
BNIP3-202ENST00000540159 CYP2A6P11509 494 aaPredicted RBP13.09□□□□□ -0.31
BNIP3-202ENST00000540159 CKMT1AP12532 417 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 PORP16435 677 aaPredicted RBP13.09□□□□□ -0.31
BNIP3-202ENST00000540159 TGFBR2P37173 567 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 VIPR2P41587 438 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms