RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 YIPF1Q9Y548 306 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 CXorf51AA0A1B0GTR3 108 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 TBKBP1A7MCY6 615 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 PSIP1O75475 530 aaKnown RBP9.28□□□□□ -0.92
CDH13-204ENST00000539548 CCNKO75909 580 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 OPN1SWP03999 348 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 GSTM1P09488 218 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 HSMCR30P0CW71 290 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 ETFAP13804 333 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 SELPP16109 830 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 TIE1P35590 1138 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 XCR1P46094 333 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 OR1E2P47887 323 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 CDC42P60953 191 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 FCHO2Q0JRZ9 810 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 SCARB2Q14108 478 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 VEPH1Q14D04 833 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 PTGES3Q15185 160 aaKnown RBP9.28□□□□□ -0.92
CDH13-204ENST00000539548 COX20Q5RI15 118 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 GCNT6Q5T4J0 391 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 TPGS2Q68CL5 300 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 AGTRAPQ6RW13 159 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 DNAJB7Q7Z6W7 309 aaPredicted RBP9.28□□□□□ -0.92
CDH13-204ENST00000539548 NLGN4XQ8N0W4 816 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 CLIP4Q8N3C7 705 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 ARL14EPQ8N8R7 260 aaPredicted RBP9.28□□□□□ -0.92
CDH13-204ENST00000539548 SLC43A3Q8NBI5 491 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 GALNT6Q8NCL4 622 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 OR52N2Q8NGI0 321 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 FIBINQ8TAL6 211 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 CAPSLQ8WWF8 208 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 ASZ1Q8WWH4 475 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 ELMO1Q92556 727 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 TRNT1Q96Q11 434 aaKnown RBP9.28□□□□□ -0.92
CDH13-204ENST00000539548 OR5M11Q96RB7 305 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 PIP5K1AQ99755 562 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 TAPBPLQ9BX59 468 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 CPEB1Q9BZB8 566 aaKnown RBP9.28□□□□□ -0.92
CDH13-204ENST00000539548 TP63Q9H3D4 680 aaPredicted RBP9.28□□□□□ -0.92
CDH13-204ENST00000539548 TMEM38AQ9H6F2 299 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 C3orf14Q9HBI5 128 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 C1GALT1Q9NS00 363 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 CREBZFQ9NS37 354 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 CLN6Q9NWW5 311 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 SH3BP4Q9P0V3 963 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 CLEC4EQ9ULY5 219 aa9.28□□□□□ -0.92
CDH13-204ENST00000539548 EXO1Q9UQ84 846 aaKnown RBP9.28□□□□□ -0.92
CDH13-204ENST00000539548 PDZK1P1A8MUH7 402 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 ARHGEF33A8MVX0 844 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 CCRL2O00421 344 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 ARHGAP33O14559 1287 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 CTDSP2O14595 271 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 PCDH17O14917 1159 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 SGTAO43765 313 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 AP2A2O94973 939 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 IFNA14P01570 189 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 PIPP12273 146 aaPredicted RBP9.27□□□□□ -0.92
CDH13-204ENST00000539548 SRCP12931 536 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 CD72P21854 359 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 CBLP22681 906 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 TIA1P31483 386 aaKnown RBP eCLIP9.27□□□□□ -0.92
CDH13-204ENST00000539548 CD70P32970 193 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 SLC15A1P46059 708 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 NKX2-5P52952 324 aaPredicted RBP9.27□□□□□ -0.92
CDH13-204ENST00000539548 CYP4F2P78329 520 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 PRKCZQ05513 592 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 EEF1A2Q05639 463 aaKnown RBP9.27□□□□□ -0.92
CDH13-204ENST00000539548 NAE1Q13564 534 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 GPNMBQ14956 572 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 TSTQ16762 297 aaKnown RBP9.27□□□□□ -0.92
CDH13-204ENST00000539548 ZNF385BQ569K4 471 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 CRB2Q5IJ48 1285 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 MPP7Q5T2T1 576 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 PLAG1Q6DJT9 500 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 ZNF544Q6NX49 715 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 PRR23CQ6ZRP0 262 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 SLC44A2Q8IWA5 706 aaPredicted RBP9.27□□□□□ -0.92
CDH13-204ENST00000539548 BBS7Q8IWZ6 715 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 UBQLNLQ8IYU4 475 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 CELF2-AS1Q8N7Q2 184 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 ST13P5Q8NFI4 369 aaPredicted RBP9.27□□□□□ -0.92
CDH13-204ENST00000539548 OR7G3Q8NG95 312 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 SETD6Q8TBK2 473 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 GEMIN6Q8WXD5 167 aaKnown RBP9.27□□□□□ -0.92
CDH13-204ENST00000539548 OR4K3Q96R72 315 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 TCF25Q9BQ70 676 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 SLC30A2Q9BRI3 323 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 VN1R3Q9BXE9 311 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 EMILIN2Q9BXX0 1053 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 REEP4Q9H6H4 257 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 BRD9Q9H8M2 597 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 ITM2CQ9NQX7 267 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 FTSJ1Q9UET6 329 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 GRIP1Q9Y3R0 1128 aa9.27□□□□□ -0.92
CDH13-204ENST00000539548 THSD7BQ9C0I4 1608 aa9.27□□□□□ -0.93
CDH13-204ENST00000539548 GNG14A0A1W2PPG7 69 aa9.27□□□□□ -0.93
CDH13-204ENST00000539548 ARRDC5A6NEK1 342 aa9.27□□□□□ -0.93
CDH13-204ENST00000539548 TMEM88BA6NKF7 163 aa9.27□□□□□ -0.93
CDH13-204ENST00000539548 ZAR1LA6NP61 321 aa9.27□□□□□ -0.93
CDH13-204ENST00000539548 OBSL1O75147 1896 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms